Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Gm43433-201ENSMUST00000196573 481 ntBASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Gm32025-201ENSMUST00000217960 307 ntBASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb1Q91Y08 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb1Q91Y08 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Gm16177-201ENSMUST00000120728 718 ntBASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms