Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.53■□□□□ 0.56
RHBDL3P58872 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
RHBDL3P58872 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.53■□□□□ 0.56
RHBDL3P58872 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RHBDL3P58872 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RHBDL3P58872 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.53■□□□□ 0.56
RHBDL3P58872 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.53■□□□□ 0.56
RHBDL3P58872 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.53■□□□□ 0.56
RHBDL3P58872 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDL3P58872 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDL3P58872 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RHBDL3P58872 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDL3P58872 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDL3P58872 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDL3P58872 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RHBDL3P58872 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RHBDL3P58872 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDL3P58872 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.52■□□□□ 0.56
RHBDL3P58872 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDL3P58872 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDL3P58872 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDL3P58872 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RHBDL3P58872 CNN2P8-201ENST00000421872 913 ntBASIC18.52■□□□□ 0.56
RHBDL3P58872 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
RHBDL3P58872 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RHBDL3P58872 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDL3P58872 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.52■□□□□ 0.56
RHBDL3P58872 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RHBDL3P58872 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.52■□□□□ 0.56
RHBDL3P58872 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.52■□□□□ 0.56
RHBDL3P58872 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.52■□□□□ 0.56
RHBDL3P58872 AC025279.2-201ENST00000569730 653 ntBASIC18.52■□□□□ 0.56
RHBDL3P58872 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDL3P58872 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDL3P58872 LINC02199-201ENST00000506655 2702 ntBASIC18.52■□□□□ 0.56
RHBDL3P58872 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.52■□□□□ 0.56
RHBDL3P58872 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RHBDL3P58872 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.52■□□□□ 0.56
RHBDL3P58872 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RHBDL3P58872 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
RHBDL3P58872 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
RHBDL3P58872 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
RHBDL3P58872 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.52■□□□□ 0.55
RHBDL3P58872 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RHBDL3P58872 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RHBDL3P58872 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.52■□□□□ 0.55
RHBDL3P58872 PCDHB19P-201ENST00000570871 2371 ntBASIC18.52■□□□□ 0.55
RHBDL3P58872 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.52■□□□□ 0.55
RHBDL3P58872 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.52■□□□□ 0.55
RHBDL3P58872 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.51■□□□□ 0.55
RHBDL3P58872 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.51■□□□□ 0.55
RHBDL3P58872 AL138709.1-201ENST00000614840 1693 ntBASIC18.51■□□□□ 0.55
RHBDL3P58872 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.51■□□□□ 0.55
RHBDL3P58872 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RHBDL3P58872 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.51■□□□□ 0.55
RHBDL3P58872 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.51■□□□□ 0.55
RHBDL3P58872 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.51■□□□□ 0.55
RHBDL3P58872 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.51■□□□□ 0.55
RHBDL3P58872 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.51■□□□□ 0.55
RHBDL3P58872 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.51■□□□□ 0.55
RHBDL3P58872 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.51■□□□□ 0.55
RHBDL3P58872 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.51■□□□□ 0.55
RHBDL3P58872 MIR4538-201ENST00000581377 78 ntBASIC18.51■□□□□ 0.55
RHBDL3P58872 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.51■□□□□ 0.55
RHBDL3P58872 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.51■□□□□ 0.55
RHBDL3P58872 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.51■□□□□ 0.55
RHBDL3P58872 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.51■□□□□ 0.55
RHBDL3P58872 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDL3P58872 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.51■□□□□ 0.55
RHBDL3P58872 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RHBDL3P58872 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDL3P58872 TUBB1P2-201ENST00000422712 1306 ntBASIC18.5■□□□□ 0.55
RHBDL3P58872 TUBB1P1-201ENST00000503144 1300 ntBASIC18.5■□□□□ 0.55
RHBDL3P58872 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.5■□□□□ 0.55
RHBDL3P58872 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDL3P58872 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDL3P58872 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RHBDL3P58872 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDL3P58872 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDL3P58872 AC084018.2-201ENST00000613093 2607 ntBASIC18.5■□□□□ 0.55
RHBDL3P58872 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms