Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sox1P53783 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox1P53783 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.04□□□□□ -0.32
Sox1P53783 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sox1P53783 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.04□□□□□ -0.32
Sox1P53783 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.04□□□□□ -0.32
Sox1P53783 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Sox1P53783 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.04□□□□□ -0.32
Sox1P53783 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.04□□□□□ -0.32
Sox1P53783 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sox1P53783 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Sox1P53783 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sox1P53783 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox1P53783 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.03□□□□□ -0.32
Sox1P53783 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Gm14644-201ENSMUST00000116671 647 ntBASIC13.03□□□□□ -0.32
Sox1P53783 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.03□□□□□ -0.32
Sox1P53783 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.03□□□□□ -0.32
Sox1P53783 Gm4726-201ENSMUST00000135604 736 ntBASIC13.03□□□□□ -0.32
Sox1P53783 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Gm6019-201ENSMUST00000148369 736 ntBASIC13.03□□□□□ -0.32
Sox1P53783 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.03□□□□□ -0.32
Sox1P53783 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.03□□□□□ -0.32
Sox1P53783 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sox1P53783 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sox1P53783 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Gm28882-201ENSMUST00000185504 314 ntBASIC13.03□□□□□ -0.32
Sox1P53783 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.03□□□□□ -0.32
Sox1P53783 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.03□□□□□ -0.32
Sox1P53783 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC13.03□□□□□ -0.32
Sox1P53783 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Sox1P53783 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sox1P53783 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox1P53783 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Sox1P53783 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Sox1P53783 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox1P53783 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Sox1P53783 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox1P53783 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox1P53783 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.02□□□□□ -0.32
Sox1P53783 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox1P53783 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox1P53783 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sox1P53783 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox1P53783 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.02□□□□□ -0.32
Sox1P53783 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.02□□□□□ -0.32
Sox1P53783 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox1P53783 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.02□□□□□ -0.32
Sox1P53783 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox1P53783 Gm12196-201ENSMUST00000120954 262 ntBASIC13.02□□□□□ -0.33
Sox1P53783 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Sox1P53783 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox1P53783 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms