Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Hoxc8P09025 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.54□□□□□ -0.24
Hoxc8P09025 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.54□□□□□ -0.24
Hoxc8P09025 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Hoxc8P09025 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxc8P09025 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Hoxc8P09025 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Hoxc8P09025 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxc8P09025 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Hoxc8P09025 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Hoxc8P09025 Gm13045-201ENSMUST00000119019 712 ntBASIC13.53□□□□□ -0.24
Hoxc8P09025 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.53□□□□□ -0.24
Hoxc8P09025 Gm9555-201ENSMUST00000200908 583 ntBASIC13.53□□□□□ -0.24
Hoxc8P09025 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Hoxc8P09025 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.53□□□□□ -0.24
Hoxc8P09025 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.53□□□□□ -0.24
Hoxc8P09025 Spcs1-203ENSMUST00000226374 592 ntBASIC13.53□□□□□ -0.24
Hoxc8P09025 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.53□□□□□ -0.24
Hoxc8P09025 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Hoxc8P09025 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.53□□□□□ -0.24
Hoxc8P09025 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.53□□□□□ -0.24
Hoxc8P09025 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxc8P09025 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.53□□□□□ -0.24
Hoxc8P09025 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Hoxc8P09025 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hoxc8P09025 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxc8P09025 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.52□□□□□ -0.24
Hoxc8P09025 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Hoxc8P09025 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxc8P09025 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxc8P09025 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxc8P09025 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Hoxc8P09025 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxc8P09025 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxc8P09025 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hoxc8P09025 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc8P09025 Gm11989-201ENSMUST00000117240 672 ntBASIC13.52□□□□□ -0.25
Hoxc8P09025 Gm11362-201ENSMUST00000118838 850 ntBASIC13.52□□□□□ -0.25
Hoxc8P09025 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.52□□□□□ -0.25
Hoxc8P09025 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.52□□□□□ -0.25
Hoxc8P09025 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc8P09025 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc8P09025 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc8P09025 Gm28071-201ENSMUST00000190355 478 ntBASIC13.52□□□□□ -0.25
Hoxc8P09025 Gm43962-201ENSMUST00000203898 190 ntBASIC13.52□□□□□ -0.25
Hoxc8P09025 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.52□□□□□ -0.25
Hoxc8P09025 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.52□□□□□ -0.25
Hoxc8P09025 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc8P09025 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Hoxc8P09025 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Hoxc8P09025 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc8P09025 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.52□□□□□ -0.25
Hoxc8P09025 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc8P09025 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hoxc8P09025 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc8P09025 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hoxc8P09025 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc8P09025 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc8P09025 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Hoxc8P09025 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc8P09025 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc8P09025 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hoxc8P09025 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc8P09025 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Hoxc8P09025 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc8P09025 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hoxc8P09025 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxc8P09025 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hoxc8P09025 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms