Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.88□□□□□ -0.19
SFTPBP07988 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.88□□□□□ -0.19
SFTPBP07988 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.88□□□□□ -0.19
SFTPBP07988 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.88□□□□□ -0.19
SFTPBP07988 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SFTPBP07988 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.88□□□□□ -0.19
SFTPBP07988 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.88□□□□□ -0.19
SFTPBP07988 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.88□□□□□ -0.19
SFTPBP07988 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.88□□□□□ -0.19
SFTPBP07988 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.88□□□□□ -0.19
SFTPBP07988 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.88□□□□□ -0.19
SFTPBP07988 AC068137.2-201ENST00000605408 478 ntBASIC13.88□□□□□ -0.19
SFTPBP07988 AC091812.2-201ENST00000619081 385 ntBASIC13.88□□□□□ -0.19
SFTPBP07988 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.88□□□□□ -0.19
SFTPBP07988 AC099063.4-201ENST00000641099 1602 ntBASIC13.88□□□□□ -0.19
SFTPBP07988 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.88□□□□□ -0.19
SFTPBP07988 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.88□□□□□ -0.19
SFTPBP07988 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SFTPBP07988 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.88□□□□□ -0.19
SFTPBP07988 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SFTPBP07988 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SFTPBP07988 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SFTPBP07988 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SFTPBP07988 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.87□□□□□ -0.19
SFTPBP07988 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.87□□□□□ -0.19
SFTPBP07988 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.87□□□□□ -0.19
SFTPBP07988 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.87□□□□□ -0.19
SFTPBP07988 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.87□□□□□ -0.19
SFTPBP07988 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.87□□□□□ -0.19
SFTPBP07988 AC093724.1-201ENST00000448659 1027 ntBASIC13.87□□□□□ -0.19
SFTPBP07988 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
SFTPBP07988 YBX1P5-201ENST00000509441 847 ntBASIC13.87□□□□□ -0.19
SFTPBP07988 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.87□□□□□ -0.19
SFTPBP07988 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.87□□□□□ -0.19
SFTPBP07988 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SFTPBP07988 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.87□□□□□ -0.19
SFTPBP07988 AL596442.2-201ENST00000610240 980 ntBASIC13.87□□□□□ -0.19
SFTPBP07988 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SFTPBP07988 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.87□□□□□ -0.19
SFTPBP07988 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.87□□□□□ -0.19
SFTPBP07988 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
SFTPBP07988 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SFTPBP07988 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SFTPBP07988 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SFTPBP07988 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.87□□□□□ -0.19
SFTPBP07988 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SFTPBP07988 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.87□□□□□ -0.19
SFTPBP07988 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.86□□□□□ -0.19
SFTPBP07988 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SFTPBP07988 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.86□□□□□ -0.19
SFTPBP07988 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SFTPBP07988 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SFTPBP07988 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SFTPBP07988 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SFTPBP07988 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SFTPBP07988 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SFTPBP07988 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SFTPBP07988 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.86□□□□□ -0.19
SFTPBP07988 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.86□□□□□ -0.19
SFTPBP07988 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SFTPBP07988 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SFTPBP07988 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
SFTPBP07988 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SFTPBP07988 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SFTPBP07988 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms