Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 AC007064.4-201ENST00000637740 555 ntBASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 MIR600HG-201ENST00000449175 5984 ntBASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 BCAR1-209ENST00000546196 1340 ntBASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 BNIP3P1-202ENST00000550043 1585 ntBASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 CICP23-201ENST00000605013 2741 ntBASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.34□□□□□ -0.11
BBS1Q8NFJ9 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.33□□□□□ -0.11
BBS1Q8NFJ9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
BBS1Q8NFJ9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
BBS1Q8NFJ9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
BBS1Q8NFJ9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BBS1Q8NFJ9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BBS1Q8NFJ9 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BBS1Q8NFJ9 WASH6P-202ENST00000359512 1437 ntBASIC14.33□□□□□ -0.11
BBS1Q8NFJ9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
BBS1Q8NFJ9 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 IGHV3-22-201ENST00000520721 359 ntBASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 AGAP7P-201ENST00000582299 2062 ntBASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 AGAP14-201ENST00000624701 2060 ntBASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 AC067930.6-201ENST00000623257 4947 ntBASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BBS1Q8NFJ9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 AC127383.1-201ENST00000444697 1800 ntBASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 MRPL3P1-201ENST00000400109 1033 ntBASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 RNA5SP419-201ENST00000515908 135 ntBASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 AL138918.1-201ENST00000568306 659 ntBASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 RN7SL510P-201ENST00000581311 263 ntBASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 AC004877.2-201ENST00000623941 599 ntBASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.32□□□□□ -0.12
BBS1Q8NFJ9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms