Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CDC7O00311 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CDC7O00311 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.61■□□□□ 0.09
CDC7O00311 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CDC7O00311 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDC7O00311 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.6■□□□□ 0.09
CDC7O00311 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CDC7O00311 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.6■□□□□ 0.09
CDC7O00311 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CDC7O00311 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.6■□□□□ 0.09
CDC7O00311 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.6■□□□□ 0.09
CDC7O00311 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.6■□□□□ 0.09
CDC7O00311 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CDC7O00311 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CDC7O00311 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.6■□□□□ 0.09
CDC7O00311 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 AZGP1P1-201ENST00000411909 902 ntBASIC15.6■□□□□ 0.09
CDC7O00311 AC211486.1-202ENST00000416371 468 ntBASIC15.6■□□□□ 0.09
CDC7O00311 AL353705.2-201ENST00000428243 662 ntBASIC15.6■□□□□ 0.09
CDC7O00311 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.6■□□□□ 0.09
CDC7O00311 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.6■□□□□ 0.09
CDC7O00311 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.6■□□□□ 0.09
CDC7O00311 AC211476.1-201ENST00000503899 468 ntBASIC15.6■□□□□ 0.09
CDC7O00311 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.6■□□□□ 0.09
CDC7O00311 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 AC092865.5-201ENST00000545435 363 ntBASIC15.6■□□□□ 0.09
CDC7O00311 AC026150.2-201ENST00000564693 1156 ntBASIC15.6■□□□□ 0.09
CDC7O00311 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.6■□□□□ 0.09
CDC7O00311 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.6■□□□□ 0.09
CDC7O00311 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
CDC7O00311 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.6■□□□□ 0.09
CDC7O00311 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDC7O00311 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.59■□□□□ 0.09
CDC7O00311 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC7O00311 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC7O00311 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC7O00311 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC7O00311 AC127383.1-201ENST00000444697 1800 ntBASIC15.59■□□□□ 0.09
CDC7O00311 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.59■□□□□ 0.09
CDC7O00311 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CDC7O00311 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.59■□□□□ 0.09
CDC7O00311 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CDC7O00311 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.59■□□□□ 0.09
CDC7O00311 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CDC7O00311 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC7O00311 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDC7O00311 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC7O00311 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.59■□□□□ 0.09
CDC7O00311 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDC7O00311 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CDC7O00311 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CDC7O00311 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC7O00311 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
CDC7O00311 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.59■□□□□ 0.09
CDC7O00311 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.59■□□□□ 0.09
CDC7O00311 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.59■□□□□ 0.09
CDC7O00311 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.59■□□□□ 0.09
CDC7O00311 HNRNPUP1-201ENST00000554987 333 ntBASIC15.59■□□□□ 0.09
CDC7O00311 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
CDC7O00311 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.59■□□□□ 0.09
CDC7O00311 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC7O00311 AC009093.7-201ENST00000623853 1223 ntBASIC15.59■□□□□ 0.09
CDC7O00311 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CDC7O00311 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.59■□□□□ 0.09
CDC7O00311 AC138035.3-201ENST00000622706 2791 ntBASIC15.59■□□□□ 0.09
CDC7O00311 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CDC7O00311 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC7O00311 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDC7O00311 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CDC7O00311 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.59■□□□□ 0.09
CDC7O00311 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.59■□□□□ 0.09
CDC7O00311 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms