Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Gm19078-201ENSMUST00000206311 727 ntBASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Gm8396-201ENSMUST00000057361 823 ntBASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa8J3QNX5 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.68□□□□□ -0.54
Shisa8J3QNX5 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.68□□□□□ -0.54
Shisa8J3QNX5 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.68□□□□□ -0.54
Shisa8J3QNX5 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms