Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 RNU1-114P-201ENST00000365297 166 ntBASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 CNN2P10-201ENST00000443067 918 ntBASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 HIST2H2BC-201ENST00000498492 580 ntBASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 AC020914.3-201ENST00000594712 304 ntBASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 ECM1P1-201ENST00000604092 1279 ntBASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KLHDC9Q8NEP7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 PRSS30P-206ENST00000641773 873 ntBASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KLHDC9Q8NEP7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 POM121L10P-201ENST00000436994 1285 ntBASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 AC079328.1-201ENST00000560358 952 ntBASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHDC9Q8NEP7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
KLHDC9Q8NEP7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
KLHDC9Q8NEP7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
KLHDC9Q8NEP7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.27■□□□□ 0.35
KLHDC9Q8NEP7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
KLHDC9Q8NEP7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
KLHDC9Q8NEP7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms