Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC005915.1-201ENST00000624912 2018 ntBASIC19.17■□□□□ 0.66
KCNA3P22001 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
KCNA3P22001 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.17■□□□□ 0.66
KCNA3P22001 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
KCNA3P22001 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 DPM3-202ENST00000368399 517 ntBASIC19.17■□□□□ 0.66
KCNA3P22001 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC19.17■□□□□ 0.66
KCNA3P22001 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC19.17■□□□□ 0.66
KCNA3P22001 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 AC012618.1-201ENST00000461223 412 ntBASIC19.17■□□□□ 0.66
KCNA3P22001 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.17■□□□□ 0.66
KCNA3P22001 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC19.17■□□□□ 0.66
KCNA3P22001 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.17■□□□□ 0.66
KCNA3P22001 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC19.17■□□□□ 0.66
KCNA3P22001 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC19.17■□□□□ 0.66
KCNA3P22001 PRSS30P-206ENST00000641773 873 ntBASIC19.17■□□□□ 0.66
KCNA3P22001 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
KCNA3P22001 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.17■□□□□ 0.66
KCNA3P22001 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
KCNA3P22001 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.17■□□□□ 0.66
KCNA3P22001 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.17■□□□□ 0.66
KCNA3P22001 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.17■□□□□ 0.66
KCNA3P22001 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.17■□□□□ 0.66
KCNA3P22001 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
KCNA3P22001 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KCNA3P22001 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.16■□□□□ 0.66
KCNA3P22001 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
KCNA3P22001 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
KCNA3P22001 AC105020.1-201ENST00000435356 2205 ntBASIC19.16■□□□□ 0.66
KCNA3P22001 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNA3P22001 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNA3P22001 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
KCNA3P22001 AC078925.2-201ENST00000624013 1973 ntBASIC19.16■□□□□ 0.66
KCNA3P22001 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.16■□□□□ 0.66
KCNA3P22001 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNA3P22001 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNA3P22001 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
KCNA3P22001 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
KCNA3P22001 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.16■□□□□ 0.66
KCNA3P22001 AP003171.2-201ENST00000528208 925 ntBASIC19.16■□□□□ 0.66
KCNA3P22001 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
KCNA3P22001 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC19.16■□□□□ 0.66
KCNA3P22001 PPY2P-201ENST00000582808 702 ntBASIC19.16■□□□□ 0.66
KCNA3P22001 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KCNA3P22001 AC091544.8-201ENST00000619490 361 ntBASIC19.16■□□□□ 0.66
KCNA3P22001 ENPP7P14-201ENST00000621765 1040 ntBASIC19.16■□□□□ 0.66
KCNA3P22001 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KCNA3P22001 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.16■□□□□ 0.66
KCNA3P22001 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KCNA3P22001 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNA3P22001 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.16■□□□□ 0.66
KCNA3P22001 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
KCNA3P22001 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
KCNA3P22001 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KCNA3P22001 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KCNA3P22001 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
KCNA3P22001 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.15■□□□□ 0.66
KCNA3P22001 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KCNA3P22001 AC090340.1-201ENST00000620778 4980 ntBASIC19.15■□□□□ 0.66
KCNA3P22001 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KCNA3P22001 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KCNA3P22001 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.15■□□□□ 0.66
KCNA3P22001 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
KCNA3P22001 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KCNA3P22001 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KCNA3P22001 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
KCNA3P22001 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KCNA3P22001 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.15■□□□□ 0.66
KCNA3P22001 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KCNA3P22001 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KCNA3P22001 AC007274.2-201ENST00000421675 662 ntBASIC19.15■□□□□ 0.66
KCNA3P22001 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.15■□□□□ 0.66
KCNA3P22001 FAM8A4P-201ENST00000435433 1213 ntBASIC19.15■□□□□ 0.66
KCNA3P22001 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.15■□□□□ 0.66
KCNA3P22001 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC19.15■□□□□ 0.66
KCNA3P22001 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC19.15■□□□□ 0.66
KCNA3P22001 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KCNA3P22001 AC073413.1-201ENST00000603927 732 ntBASIC19.15■□□□□ 0.66
KCNA3P22001 AC073352.2-201ENST00000609385 439 ntBASIC19.15■□□□□ 0.66
KCNA3P22001 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KCNA3P22001 HLA-C-210ENST00000640219 976 ntBASIC19.15■□□□□ 0.66
KCNA3P22001 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.15■□□□□ 0.66
KCNA3P22001 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.15■□□□□ 0.66
KCNA3P22001 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.15■□□□□ 0.66
KCNA3P22001 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms