Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.34□□□□□ -0.11
PHF3Q92576 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.34□□□□□ -0.11
PHF3Q92576 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.34□□□□□ -0.11
PHF3Q92576 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.34□□□□□ -0.11
PHF3Q92576 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PHF3Q92576 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.34□□□□□ -0.11
PHF3Q92576 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.34□□□□□ -0.11
PHF3Q92576 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.34□□□□□ -0.11
PHF3Q92576 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.34□□□□□ -0.11
PHF3Q92576 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.34□□□□□ -0.11
PHF3Q92576 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.34□□□□□ -0.11
PHF3Q92576 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PHF3Q92576 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PHF3Q92576 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.34□□□□□ -0.11
PHF3Q92576 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
PHF3Q92576 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.34□□□□□ -0.11
PHF3Q92576 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
PHF3Q92576 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
PHF3Q92576 RRP7BP-205ENST00000566851 833 ntBASIC14.34□□□□□ -0.11
PHF3Q92576 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.34□□□□□ -0.11
PHF3Q92576 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PHF3Q92576 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PHF3Q92576 AC008735.3-201ENST00000596646 500 ntBASIC14.34□□□□□ -0.11
PHF3Q92576 MIR6069-201ENST00000620069 79 ntBASIC14.34□□□□□ -0.11
PHF3Q92576 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.34□□□□□ -0.11
PHF3Q92576 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.34□□□□□ -0.11
PHF3Q92576 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF3Q92576 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PHF3Q92576 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.33□□□□□ -0.11
PHF3Q92576 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.11
PHF3Q92576 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PHF3Q92576 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
PHF3Q92576 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PHF3Q92576 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PHF3Q92576 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.33□□□□□ -0.12
PHF3Q92576 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.33□□□□□ -0.12
PHF3Q92576 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PHF3Q92576 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PHF3Q92576 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.33□□□□□ -0.12
PHF3Q92576 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 AL512384.1-201ENST00000406683 331 ntBASIC14.33□□□□□ -0.12
PHF3Q92576 HLA-V-201ENST00000429037 534 ntBASIC14.33□□□□□ -0.12
PHF3Q92576 GNAQP1-201ENST00000444815 1067 ntBASIC14.33□□□□□ -0.12
PHF3Q92576 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.33□□□□□ -0.12
PHF3Q92576 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.33□□□□□ -0.12
PHF3Q92576 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.33□□□□□ -0.12
PHF3Q92576 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.33□□□□□ -0.12
PHF3Q92576 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.33□□□□□ -0.12
PHF3Q92576 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PHF3Q92576 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.33□□□□□ -0.12
PHF3Q92576 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.33□□□□□ -0.12
PHF3Q92576 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.33□□□□□ -0.12
PHF3Q92576 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PHF3Q92576 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.33□□□□□ -0.12
PHF3Q92576 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
PHF3Q92576 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PHF3Q92576 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.32□□□□□ -0.12
PHF3Q92576 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PHF3Q92576 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.32□□□□□ -0.12
PHF3Q92576 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms