Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Col23a1Q8K4G2 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col23a1Q8K4G2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col23a1Q8K4G2 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.44■□□□□ 0.06
Col23a1Q8K4G2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.44■□□□□ 0.06
Col23a1Q8K4G2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col23a1Q8K4G2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col23a1Q8K4G2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col23a1Q8K4G2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col23a1Q8K4G2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col23a1Q8K4G2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Gm14724-201ENSMUST00000118400 537 ntBASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Gm1848-201ENSMUST00000120711 789 ntBASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Gm44329-201ENSMUST00000197469 112 ntBASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Gm10288-201ENSMUST00000084614 537 ntBASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Gm13142-201ENSMUST00000117213 1453 ntBASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Gm13384-201ENSMUST00000117166 1344 ntBASIC15.43■□□□□ 0.06
Col23a1Q8K4G2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Gm12857-201ENSMUST00000117678 592 ntBASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Gm13937-201ENSMUST00000121000 988 ntBASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Gm13182-201ENSMUST00000122241 312 ntBASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Cd63-ps-202ENSMUST00000154992 717 ntBASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Gm20392-201ENSMUST00000173047 701 ntBASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Gm18304-201ENSMUST00000189162 546 ntBASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Ighv1-48-201ENSMUST00000191795 294 ntBASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Gm43184-201ENSMUST00000197247 542 ntBASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Gm2965-201ENSMUST00000198365 343 ntBASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 AC159376.1-201ENSMUST00000218504 630 ntBASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Gm8325-201ENSMUST00000099086 453 ntBASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col23a1Q8K4G2 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.41■□□□□ 0.06
Col23a1Q8K4G2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.41■□□□□ 0.06
Col23a1Q8K4G2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Col23a1Q8K4G2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Col23a1Q8K4G2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col23a1Q8K4G2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col23a1Q8K4G2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col23a1Q8K4G2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col23a1Q8K4G2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
Col23a1Q8K4G2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col23a1Q8K4G2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col23a1Q8K4G2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col23a1Q8K4G2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms