Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 UXT-AS1-201ENST00000590504 1525 ntBASIC14.15□□□□□ -0.14
LINC00346Q8IVM7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
LINC00346Q8IVM7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 AC243562.2-201ENST00000561247 970 ntBASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 C20orf181-201ENST00000623918 480 ntBASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 AL691432.1-201ENST00000596308 1422 ntBASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00346Q8IVM7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 BNIP3P1-202ENST00000550043 1585 ntBASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 AC004832.2-201ENST00000426397 482 ntBASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 HTR5BP-201ENST00000430851 1154 ntBASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 AL671883.3-201ENST00000603274 991 ntBASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00346Q8IVM7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms