Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmx3P42581 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hmx3P42581 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.81□□□□□ -0.68
Hmx3P42581 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Hmx3P42581 Gm13616-201ENSMUST00000120600 222 ntBASIC10.81□□□□□ -0.68
Hmx3P42581 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Hmx3P42581 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmx3P42581 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hmx3P42581 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmx3P42581 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.81□□□□□ -0.68
Hmx3P42581 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.81□□□□□ -0.68
Hmx3P42581 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.81□□□□□ -0.68
Hmx3P42581 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.81□□□□□ -0.68
Hmx3P42581 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmx3P42581 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Hmx3P42581 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmx3P42581 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmx3P42581 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hmx3P42581 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmx3P42581 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmx3P42581 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmx3P42581 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmx3P42581 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmx3P42581 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmx3P42581 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Hmx3P42581 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hmx3P42581 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmx3P42581 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmx3P42581 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmx3P42581 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC10.81□□□□□ -0.68
Hmx3P42581 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.81□□□□□ -0.68
Hmx3P42581 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmx3P42581 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.81□□□□□ -0.68
Hmx3P42581 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmx3P42581 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmx3P42581 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hmx3P42581 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmx3P42581 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmx3P42581 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hmx3P42581 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmx3P42581 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.8□□□□□ -0.68
Hmx3P42581 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hmx3P42581 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmx3P42581 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hmx3P42581 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmx3P42581 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmx3P42581 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hmx3P42581 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.8□□□□□ -0.68
Hmx3P42581 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.8□□□□□ -0.68
Hmx3P42581 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Hmx3P42581 Gm21470-201ENSMUST00000187680 696 ntBASIC10.8□□□□□ -0.68
Hmx3P42581 Gm44344-201ENSMUST00000200287 129 ntBASIC10.8□□□□□ -0.68
Hmx3P42581 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hmx3P42581 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hmx3P42581 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmx3P42581 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmx3P42581 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmx3P42581 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmx3P42581 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmx3P42581 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hmx3P42581 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmx3P42581 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hmx3P42581 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmx3P42581 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Hmx3P42581 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.79□□□□□ -0.68
Hmx3P42581 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.79□□□□□ -0.68
Hmx3P42581 Ighv1-51-201ENSMUST00000192903 354 ntBASIC10.79□□□□□ -0.68
Hmx3P42581 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.79□□□□□ -0.68
Hmx3P42581 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.79□□□□□ -0.68
Hmx3P42581 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Hmx3P42581 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Hmx3P42581 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Hmx3P42581 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Hmx3P42581 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.79□□□□□ -0.68
Hmx3P42581 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hmx3P42581 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmx3P42581 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms