Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 AC061975.2-201ENST00000581722 295 ntBASIC14.81□□□□□ -0.04
UBQLN3Q9H347 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 DBET-201ENST00000630918 3363 ntBASIC14.81□□□□□ -0.04
UBQLN3Q9H347 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 AC073347.1-201ENST00000421633 2643 ntBASIC14.8□□□□□ -0.04
UBQLN3Q9H347 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 AL353705.2-201ENST00000428243 662 ntBASIC14.8□□□□□ -0.04
UBQLN3Q9H347 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 AC069120.2-201ENST00000524091 540 ntBASIC14.8□□□□□ -0.04
UBQLN3Q9H347 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 AC003101.2-201ENST00000612557 442 ntBASIC14.8□□□□□ -0.04
UBQLN3Q9H347 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.8□□□□□ -0.04
UBQLN3Q9H347 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 TREML5P-201ENST00000421694 576 ntBASIC14.79□□□□□ -0.04
UBQLN3Q9H347 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 AL035456.1-201ENST00000456064 1369 ntBASIC14.79□□□□□ -0.04
UBQLN3Q9H347 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 BANF1P1-201ENST00000553684 263 ntBASIC14.79□□□□□ -0.04
UBQLN3Q9H347 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 SPCS2P1-201ENST00000561636 679 ntBASIC14.79□□□□□ -0.04
UBQLN3Q9H347 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 AC024267.1-201ENST00000582320 895 ntBASIC14.79□□□□□ -0.04
UBQLN3Q9H347 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 FO538757.1-201ENST00000623083 1397 ntBASIC14.79□□□□□ -0.04
UBQLN3Q9H347 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN3Q9H347 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms