Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ABCA3Q99758 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ABCA3Q99758 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ABCA3Q99758 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC20.63■□□□□ 0.89
ABCA3Q99758 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ABCA3Q99758 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ABCA3Q99758 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ABCA3Q99758 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ABCA3Q99758 RPSAP31-201ENST00000416648 895 ntBASIC20.63■□□□□ 0.89
ABCA3Q99758 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC20.63■□□□□ 0.89
ABCA3Q99758 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC20.63■□□□□ 0.89
ABCA3Q99758 NOC2LP1-201ENST00000450578 752 ntBASIC20.63■□□□□ 0.89
ABCA3Q99758 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ABCA3Q99758 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ABCA3Q99758 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC20.63■□□□□ 0.89
ABCA3Q99758 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
ABCA3Q99758 AC004899.1-201ENST00000424687 1714 ntBASIC20.63■□□□□ 0.89
ABCA3Q99758 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ABCA3Q99758 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ABCA3Q99758 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ABCA3Q99758 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.63■□□□□ 0.89
ABCA3Q99758 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ABCA3Q99758 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ABCA3Q99758 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ABCA3Q99758 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ABCA3Q99758 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA3Q99758 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.62■□□□□ 0.89
ABCA3Q99758 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA3Q99758 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA3Q99758 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA3Q99758 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
ABCA3Q99758 ISCA2P1-201ENST00000425548 448 ntBASIC20.62■□□□□ 0.89
ABCA3Q99758 AL353637.1-201ENST00000451571 732 ntBASIC20.62■□□□□ 0.89
ABCA3Q99758 AC012618.1-201ENST00000461223 412 ntBASIC20.62■□□□□ 0.89
ABCA3Q99758 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA3Q99758 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA3Q99758 AC019193.1-201ENST00000506678 823 ntBASIC20.62■□□□□ 0.89
ABCA3Q99758 LY6E-208ENST00000520531 490 ntTSL 2 BASIC20.62■□□□□ 0.89
ABCA3Q99758 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC20.62■□□□□ 0.89
ABCA3Q99758 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA3Q99758 AL645728.2-202ENST00000641679 227 ntBASIC20.62■□□□□ 0.89
ABCA3Q99758 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA3Q99758 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA3Q99758 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA3Q99758 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
ABCA3Q99758 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ABCA3Q99758 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA3Q99758 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
ABCA3Q99758 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ABCA3Q99758 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ABCA3Q99758 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ABCA3Q99758 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ABCA3Q99758 PTK2-225ENST00000520892 571 ntTSL 4 BASIC20.61■□□□□ 0.89
ABCA3Q99758 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC20.61■□□□□ 0.89
ABCA3Q99758 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ABCA3Q99758 AC090164.2-201ENST00000611487 516 ntBASIC20.61■□□□□ 0.89
ABCA3Q99758 AC138466.3-201ENST00000619983 221 ntBASIC20.61■□□□□ 0.89
ABCA3Q99758 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ABCA3Q99758 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ABCA3Q99758 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.61■□□□□ 0.89
ABCA3Q99758 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC20.61■□□□□ 0.89
ABCA3Q99758 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ABCA3Q99758 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ABCA3Q99758 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.61■□□□□ 0.89
ABCA3Q99758 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ABCA3Q99758 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ABCA3Q99758 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ABCA3Q99758 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ABCA3Q99758 NPPA-201ENST00000376476 728 ntTSL 3 BASIC20.61■□□□□ 0.89
ABCA3Q99758 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC20.61■□□□□ 0.89
ABCA3Q99758 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC20.61■□□□□ 0.89
ABCA3Q99758 EID1-202ENST00000560490 584 ntTSL 3 BASIC20.61■□□□□ 0.89
ABCA3Q99758 MIR4754-201ENST00000582477 89 ntBASIC20.61■□□□□ 0.89
ABCA3Q99758 AL358472.3-201ENST00000608147 415 ntBASIC20.61■□□□□ 0.89
ABCA3Q99758 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ABCA3Q99758 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ABCA3Q99758 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.6■□□□□ 0.89
ABCA3Q99758 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCA3Q99758 KRT8P29-201ENST00000420409 1371 ntBASIC20.6■□□□□ 0.89
ABCA3Q99758 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.6■□□□□ 0.89
ABCA3Q99758 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCA3Q99758 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCA3Q99758 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ABCA3Q99758 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ABCA3Q99758 AL645937.2-201ENST00000396808 931 ntBASIC20.6■□□□□ 0.89
ABCA3Q99758 RPL13AP19-201ENST00000434320 584 ntBASIC20.6■□□□□ 0.89
ABCA3Q99758 AC098935.1-201ENST00000446057 611 ntBASIC20.6■□□□□ 0.89
ABCA3Q99758 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ABCA3Q99758 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC20.6■□□□□ 0.89
ABCA3Q99758 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC20.6■□□□□ 0.89
ABCA3Q99758 IRF3-215ENST00000596822 823 ntTSL 3 BASIC20.6■□□□□ 0.89
ABCA3Q99758 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC20.6■□□□□ 0.89
ABCA3Q99758 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC20.6■□□□□ 0.89
ABCA3Q99758 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCA3Q99758 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCA3Q99758 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCA3Q99758 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ABCA3Q99758 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ABCA3Q99758 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ABCA3Q99758 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms