Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.9■□□□□ 0.62
CTR9Q6PD62 AL353779.1-201ENST00000434793 351 ntBASIC18.9■□□□□ 0.62
CTR9Q6PD62 CHCHD2P3-201ENST00000603038 451 ntBASIC18.9■□□□□ 0.62
CTR9Q6PD62 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.9■□□□□ 0.62
CTR9Q6PD62 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CTR9Q6PD62 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.9■□□□□ 0.62
CTR9Q6PD62 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CTR9Q6PD62 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.89■□□□□ 0.62
CTR9Q6PD62 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CTR9Q6PD62 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CTR9Q6PD62 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTR9Q6PD62 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.89■□□□□ 0.61
CTR9Q6PD62 CDC14C-201ENST00000428251 1719 ntBASIC18.89■□□□□ 0.61
CTR9Q6PD62 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTR9Q6PD62 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTR9Q6PD62 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTR9Q6PD62 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
CTR9Q6PD62 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTR9Q6PD62 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CTR9Q6PD62 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CTR9Q6PD62 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.89■□□□□ 0.61
CTR9Q6PD62 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.89■□□□□ 0.61
CTR9Q6PD62 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTR9Q6PD62 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.89■□□□□ 0.61
CTR9Q6PD62 DFFBP1-201ENST00000433250 979 ntBASIC18.89■□□□□ 0.61
CTR9Q6PD62 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTR9Q6PD62 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.89■□□□□ 0.61
CTR9Q6PD62 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTR9Q6PD62 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTR9Q6PD62 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
CTR9Q6PD62 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CTR9Q6PD62 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CTR9Q6PD62 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
CTR9Q6PD62 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.89■□□□□ 0.61
CTR9Q6PD62 AC025048.6-201ENST00000634326 1161 ntBASIC18.89■□□□□ 0.61
CTR9Q6PD62 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTR9Q6PD62 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTR9Q6PD62 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTR9Q6PD62 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTR9Q6PD62 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTR9Q6PD62 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTR9Q6PD62 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTR9Q6PD62 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CTR9Q6PD62 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CTR9Q6PD62 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CTR9Q6PD62 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.88■□□□□ 0.61
CTR9Q6PD62 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.88■□□□□ 0.61
CTR9Q6PD62 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.88■□□□□ 0.61
CTR9Q6PD62 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.88■□□□□ 0.61
CTR9Q6PD62 AC136604.1-201ENST00000418535 575 ntBASIC18.88■□□□□ 0.61
CTR9Q6PD62 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CTR9Q6PD62 KRT18P64-201ENST00000434946 1219 ntBASIC18.88■□□□□ 0.61
CTR9Q6PD62 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CTR9Q6PD62 AC093004.1-201ENST00000508850 424 ntBASIC18.88■□□□□ 0.61
CTR9Q6PD62 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.88■□□□□ 0.61
CTR9Q6PD62 TPRX2P-201ENST00000535362 881 ntBASIC18.88■□□□□ 0.61
CTR9Q6PD62 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CTR9Q6PD62 TP53TG3HP-202ENST00000569755 579 ntBASIC18.88■□□□□ 0.61
CTR9Q6PD62 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.88■□□□□ 0.61
CTR9Q6PD62 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 SLC7A15P-201ENST00000424028 1363 ntBASIC18.88■□□□□ 0.61
CTR9Q6PD62 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CTR9Q6PD62 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CTR9Q6PD62 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.88■□□□□ 0.61
CTR9Q6PD62 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 LINC02447-202ENST00000501888 2146 ntBASIC18.88■□□□□ 0.61
CTR9Q6PD62 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTR9Q6PD62 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms