Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 MIR1233-2-201ENST00000408138 82 ntBASIC14.56□□□□□ -0.08
NIPAL3Q6P499 MIR1233-1-201ENST00000408722 82 ntBASIC14.56□□□□□ -0.08
NIPAL3Q6P499 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 SPCS2P4-201ENST00000436160 681 ntBASIC14.56□□□□□ -0.08
NIPAL3Q6P499 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 AC008267.7-201ENST00000624570 1194 ntBASIC14.56□□□□□ -0.08
NIPAL3Q6P499 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NIPAL3Q6P499 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 AC099063.4-201ENST00000641099 1602 ntBASIC14.55□□□□□ -0.08
NIPAL3Q6P499 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 CICP13-201ENST00000422015 2789 ntBASIC14.55□□□□□ -0.08
NIPAL3Q6P499 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 AL592309.1-201ENST00000443127 649 ntBASIC14.55□□□□□ -0.08
NIPAL3Q6P499 AC245100.5-201ENST00000452108 331 ntBASIC14.55□□□□□ -0.08
NIPAL3Q6P499 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 AC105233.2-201ENST00000523697 349 ntBASIC14.55□□□□□ -0.08
NIPAL3Q6P499 AF228730.5-201ENST00000530288 346 ntBASIC14.55□□□□□ -0.08
NIPAL3Q6P499 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 AC105339.1-204ENST00000636249 355 ntBASIC14.55□□□□□ -0.08
NIPAL3Q6P499 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 UXT-AS1-201ENST00000590504 1525 ntBASIC14.55□□□□□ -0.08
NIPAL3Q6P499 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms