Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.9□□□□□ -0.51
Sftpa1P35242 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sftpa1P35242 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.89□□□□□ -0.51
Sftpa1P35242 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Sftpa1P35242 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.89□□□□□ -0.51
Sftpa1P35242 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.89□□□□□ -0.51
Sftpa1P35242 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Sftpa1P35242 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Sftpa1P35242 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.89□□□□□ -0.51
Sftpa1P35242 Gm9550-201ENSMUST00000161130 862 ntBASIC11.89□□□□□ -0.51
Sftpa1P35242 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.89□□□□□ -0.51
Sftpa1P35242 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.89□□□□□ -0.51
Sftpa1P35242 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.89□□□□□ -0.51
Sftpa1P35242 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Gm45433-201ENSMUST00000209386 247 ntBASIC11.89□□□□□ -0.51
Sftpa1P35242 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.89□□□□□ -0.51
Sftpa1P35242 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Sftpa1P35242 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.89□□□□□ -0.51
Sftpa1P35242 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.89□□□□□ -0.51
Sftpa1P35242 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.89□□□□□ -0.51
Sftpa1P35242 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sftpa1P35242 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sftpa1P35242 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sftpa1P35242 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Sftpa1P35242 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sftpa1P35242 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sftpa1P35242 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sftpa1P35242 Gm13736-201ENSMUST00000119272 253 ntBASIC11.88□□□□□ -0.51
Sftpa1P35242 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Gm23363-201ENSMUST00000175024 79 ntBASIC11.88□□□□□ -0.51
Sftpa1P35242 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Sftpa1P35242 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
Sftpa1P35242 Gm37201-201ENSMUST00000191845 523 ntBASIC11.88□□□□□ -0.51
Sftpa1P35242 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Gm9555-201ENSMUST00000200908 583 ntBASIC11.88□□□□□ -0.51
Sftpa1P35242 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.88□□□□□ -0.51
Sftpa1P35242 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.88□□□□□ -0.51
Sftpa1P35242 Gm45770-201ENSMUST00000212105 616 ntBASIC11.88□□□□□ -0.51
Sftpa1P35242 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sftpa1P35242 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sftpa1P35242 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sftpa1P35242 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sftpa1P35242 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sftpa1P35242 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.87□□□□□ -0.51
Sftpa1P35242 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sftpa1P35242 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sftpa1P35242 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sftpa1P35242 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms