Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Col4a1P02463 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col4a1P02463 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Col4a1P02463 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a1P02463 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC15.53■□□□□ 0.08
Col4a1P02463 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col4a1P02463 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a1P02463 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a1P02463 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a1P02463 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col4a1P02463 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Col4a1P02463 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a1P02463 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a1P02463 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col4a1P02463 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a1P02463 Gm14058-201ENSMUST00000116082 735 ntBASIC15.53■□□□□ 0.08
Col4a1P02463 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a1P02463 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC15.53■□□□□ 0.08
Col4a1P02463 Gm44958-201ENSMUST00000203734 736 ntBASIC15.53■□□□□ 0.08
Col4a1P02463 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC15.53■□□□□ 0.08
Col4a1P02463 Gm17827-201ENSMUST00000211825 742 ntBASIC15.53■□□□□ 0.08
Col4a1P02463 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a1P02463 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.53■□□□□ 0.08
Col4a1P02463 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.53■□□□□ 0.08
Col4a1P02463 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a1P02463 Gm5455-201ENSMUST00000058710 715 ntBASIC15.53■□□□□ 0.08
Col4a1P02463 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a1P02463 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col4a1P02463 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a1P02463 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.53■□□□□ 0.08
Col4a1P02463 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a1P02463 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Col4a1P02463 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a1P02463 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a1P02463 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a1P02463 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a1P02463 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a1P02463 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a1P02463 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Col4a1P02463 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a1P02463 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a1P02463 Gm7851-201ENSMUST00000117574 323 ntBASIC15.52■□□□□ 0.08
Col4a1P02463 Gm13611-201ENSMUST00000118269 318 ntBASIC15.52■□□□□ 0.08
Col4a1P02463 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC15.52■□□□□ 0.08
Col4a1P02463 Gm42682-201ENSMUST00000198349 1265 ntBASIC15.52■□□□□ 0.08
Col4a1P02463 Gm10109-202ENSMUST00000206890 1211 ntBASIC15.52■□□□□ 0.08
Col4a1P02463 CT009713.8-201ENSMUST00000225448 560 ntBASIC15.52■□□□□ 0.08
Col4a1P02463 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a1P02463 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a1P02463 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a1P02463 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Col4a1P02463 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col4a1P02463 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col4a1P02463 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col4a1P02463 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Col4a1P02463 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col4a1P02463 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col4a1P02463 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col4a1P02463 Gm21998-201ENSMUST00000117552 1308 ntBASIC15.51■□□□□ 0.07
Col4a1P02463 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a1P02463 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Col4a1P02463 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Col4a1P02463 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.51■□□□□ 0.07
Col4a1P02463 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Col4a1P02463 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a1P02463 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a1P02463 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a1P02463 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a1P02463 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a1P02463 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a1P02463 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC15.51■□□□□ 0.07
Col4a1P02463 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a1P02463 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Col4a1P02463 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Col4a1P02463 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a1P02463 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Col4a1P02463 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a1P02463 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.51■□□□□ 0.07
Col4a1P02463 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a1P02463 Gm12165-201ENSMUST00000117047 342 ntBASIC15.51■□□□□ 0.07
Col4a1P02463 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Col4a1P02463 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a1P02463 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a1P02463 Gm37835-201ENSMUST00000193305 361 ntBASIC15.51■□□□□ 0.07
Col4a1P02463 Gm44551-201ENSMUST00000208804 171 ntBASIC15.51■□□□□ 0.07
Col4a1P02463 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a1P02463 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Col4a1P02463 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a1P02463 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.5■□□□□ 0.07
Col4a1P02463 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.5■□□□□ 0.07
Col4a1P02463 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a1P02463 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms