Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDX39AO00148 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX39AO00148 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
DDX39AO00148 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.92■□□□□ 0.46
DDX39AO00148 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.92■□□□□ 0.46
DDX39AO00148 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX39AO00148 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDX39AO00148 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDX39AO00148 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX39AO00148 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX39AO00148 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX39AO00148 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX39AO00148 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX39AO00148 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
DDX39AO00148 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX39AO00148 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX39AO00148 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX39AO00148 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX39AO00148 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX39AO00148 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
DDX39AO00148 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
DDX39AO00148 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX39AO00148 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.91■□□□□ 0.46
DDX39AO00148 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.91■□□□□ 0.46
DDX39AO00148 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX39AO00148 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX39AO00148 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX39AO00148 TARDBPP1-201ENST00000442013 1203 ntBASIC17.91■□□□□ 0.46
DDX39AO00148 PHKG1P2-201ENST00000457537 863 ntBASIC17.91■□□□□ 0.46
DDX39AO00148 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX39AO00148 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX39AO00148 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX39AO00148 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.91■□□□□ 0.46
DDX39AO00148 AC023310.3-201ENST00000557027 670 ntBASIC17.91■□□□□ 0.46
DDX39AO00148 AC100756.1-201ENST00000562736 682 ntBASIC17.91■□□□□ 0.46
DDX39AO00148 AC138749.3-201ENST00000567691 622 ntBASIC17.91■□□□□ 0.46
DDX39AO00148 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
DDX39AO00148 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.91■□□□□ 0.46
DDX39AO00148 AC116165.1-201ENST00000611806 668 ntBASIC17.91■□□□□ 0.46
DDX39AO00148 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
DDX39AO00148 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
DDX39AO00148 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX39AO00148 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDX39AO00148 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX39AO00148 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.91■□□□□ 0.46
DDX39AO00148 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX39AO00148 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDX39AO00148 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
DDX39AO00148 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.91■□□□□ 0.46
DDX39AO00148 AC010491.1-201ENST00000563101 2797 ntBASIC17.91■□□□□ 0.46
DDX39AO00148 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
DDX39AO00148 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
DDX39AO00148 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
DDX39AO00148 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 CYP2T1P-202ENST00000641596 2535 ntBASIC17.9■□□□□ 0.46
DDX39AO00148 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 AC074338.1-201ENST00000416825 156 ntBASIC17.9■□□□□ 0.46
DDX39AO00148 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX39AO00148 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX39AO00148 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.9■□□□□ 0.46
DDX39AO00148 API5-211ENST00000534695 560 ntTSL 5 BASIC17.9■□□□□ 0.46
DDX39AO00148 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
DDX39AO00148 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.9■□□□□ 0.46
DDX39AO00148 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.9■□□□□ 0.46
DDX39AO00148 SPDYE22P-201ENST00000582158 798 ntBASIC17.9■□□□□ 0.46
DDX39AO00148 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDX39AO00148 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.9■□□□□ 0.46
DDX39AO00148 AC024909.3-201ENST00000611513 2257 ntBASIC17.89■□□□□ 0.46
DDX39AO00148 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
DDX39AO00148 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX39AO00148 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX39AO00148 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
DDX39AO00148 AC124067.4-201ENST00000519691 2379 ntBASIC17.89■□□□□ 0.45
DDX39AO00148 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.89■□□□□ 0.45
DDX39AO00148 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX39AO00148 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
DDX39AO00148 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.89■□□□□ 0.45
DDX39AO00148 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDX39AO00148 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.89■□□□□ 0.45
DDX39AO00148 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
DDX39AO00148 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.89■□□□□ 0.45
DDX39AO00148 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
DDX39AO00148 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
DDX39AO00148 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms