Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AL139010.1-201ENST00000454878 894 ntBASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 RN7SL692P-201ENST00000464677 288 ntBASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 AC044860.1-202ENST00000559481 777 ntBASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 AL132655.2-201ENST00000596276 594 ntBASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA2E9PIF3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 AL596087.1-201ENST00000400979 1969 ntBASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 GAPDHP21-201ENST00000450301 1010 ntBASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 AC010336.2-201ENST00000564226 506 ntBASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 AC104794.3-201ENST00000566840 1248 ntBASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 MST1L-201ENST00000442552 2185 ntBASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 KRT8P12-202ENST00000472924 1397 ntBASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 BTBD7P1-201ENST00000447253 1453 ntBASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA2E9PIF3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 AL596325.1-201ENST00000563991 1082 ntBASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 AL033527.5-202ENST00000641632 1098 ntBASIC14.54□□□□□ -0.08
NPIPA2E9PIF3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms