Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRFN1Q9P244 SLC7A15P-201ENST00000424028 1363 ntBASIC14.66□□□□□ -0.06
LRFN1Q9P244 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRFN1Q9P244 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRFN1Q9P244 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRFN1Q9P244 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRFN1Q9P244 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRFN1Q9P244 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LRFN1Q9P244 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRFN1Q9P244 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRFN1Q9P244 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRFN1Q9P244 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRFN1Q9P244 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRFN1Q9P244 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRFN1Q9P244 CU639417.3-201ENST00000624240 1404 ntBASIC14.66□□□□□ -0.06
LRFN1Q9P244 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRFN1Q9P244 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRFN1Q9P244 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRFN1Q9P244 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRFN1Q9P244 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRFN1Q9P244 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRFN1Q9P244 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRFN1Q9P244 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRFN1Q9P244 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRFN1Q9P244 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRFN1Q9P244 AC098614.1-201ENST00000368528 745 ntBASIC14.65□□□□□ -0.06
LRFN1Q9P244 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRFN1Q9P244 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 HAUS4P1-201ENST00000406739 1145 ntBASIC14.65□□□□□ -0.06
LRFN1Q9P244 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 COX5BP8-201ENST00000416911 349 ntBASIC14.65□□□□□ -0.06
LRFN1Q9P244 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 KRT17P7-201ENST00000451704 1104 ntBASIC14.65□□□□□ -0.06
LRFN1Q9P244 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 AC023310.3-201ENST00000557027 670 ntBASIC14.65□□□□□ -0.06
LRFN1Q9P244 AC100756.1-201ENST00000562736 682 ntBASIC14.65□□□□□ -0.06
LRFN1Q9P244 AC138749.3-201ENST00000567691 622 ntBASIC14.65□□□□□ -0.06
LRFN1Q9P244 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 CHCHD2P3-201ENST00000603038 451 ntBASIC14.65□□□□□ -0.06
LRFN1Q9P244 AC116165.1-201ENST00000611806 668 ntBASIC14.65□□□□□ -0.06
LRFN1Q9P244 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRFN1Q9P244 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRFN1Q9P244 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRFN1Q9P244 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRFN1Q9P244 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRFN1Q9P244 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LRFN1Q9P244 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
LRFN1Q9P244 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
LRFN1Q9P244 BNIP3P1-202ENST00000550043 1585 ntBASIC14.64□□□□□ -0.07
LRFN1Q9P244 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRFN1Q9P244 AC138969.3-201ENST00000546612 1459 ntBASIC14.64□□□□□ -0.07
LRFN1Q9P244 AC138932.2-201ENST00000548268 1459 ntBASIC14.64□□□□□ -0.07
LRFN1Q9P244 AC126755.4-201ENST00000549796 1459 ntBASIC14.64□□□□□ -0.07
LRFN1Q9P244 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRFN1Q9P244 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRFN1Q9P244 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRFN1Q9P244 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
LRFN1Q9P244 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
LRFN1Q9P244 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRFN1Q9P244 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms