Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 BRI3BPP1-201ENST00000594224 787 ntBASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 AC093726.1-201ENST00000608064 963 ntBASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 AL645728.2-202ENST00000641679 227 ntBASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
KIAA1549Q9HCM3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
KIAA1549Q9HCM3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.08□□□□□ -0.15
KIAA1549Q9HCM3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 AP005117.1-202ENST00000581724 1908 ntBASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 RN7SL399P-201ENST00000471648 279 ntBASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 PPT1-215ENST00000641471 2368 ntBASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 HTR7P1-202ENST00000624664 4411 ntBASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
KIAA1549Q9HCM3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 RPL13P2-201ENST00000440687 659 ntBASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 KRT18P43-201ENST00000469825 1281 ntBASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 AC105250.1-201ENST00000509378 2057 ntBASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 ATP5G2P4-201ENST00000442175 420 ntBASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 AL049840.4-201ENST00000602422 811 ntBASIC14.07□□□□□ -0.16
KIAA1549Q9HCM3 AC107373.2-201ENST00000607735 490 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms