Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF34Q969K3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF34Q969K3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF34Q969K3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RNF34Q969K3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF34Q969K3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.74■□□□□ 0.27
RNF34Q969K3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF34Q969K3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF34Q969K3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF34Q969K3 AC027369.6-201ENST00000525520 931 ntBASIC16.74■□□□□ 0.27
RNF34Q969K3 BANF1P1-201ENST00000553684 263 ntBASIC16.74■□□□□ 0.27
RNF34Q969K3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF34Q969K3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF34Q969K3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF34Q969K3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF34Q969K3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF34Q969K3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF34Q969K3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF34Q969K3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF34Q969K3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
RNF34Q969K3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF34Q969K3 AP001282.1-201ENST00000531301 1499 ntBASIC16.73■□□□□ 0.27
RNF34Q969K3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF34Q969K3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF34Q969K3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
RNF34Q969K3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF34Q969K3 AC134407.2-201ENST00000625089 1978 ntBASIC16.73■□□□□ 0.27
RNF34Q969K3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
RNF34Q969K3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RNF34Q969K3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 AC004987.2-201ENST00000395959 1148 ntBASIC16.73■□□□□ 0.27
RNF34Q969K3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF34Q969K3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RNF34Q969K3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF34Q969K3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF34Q969K3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RNF34Q969K3 AC073592.8-201ENST00000624126 511 ntBASIC16.73■□□□□ 0.27
RNF34Q969K3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RNF34Q969K3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF34Q969K3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RNF34Q969K3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF34Q969K3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF34Q969K3 FO538757.1-201ENST00000623083 1397 ntBASIC16.73■□□□□ 0.27
RNF34Q969K3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RNF34Q969K3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF34Q969K3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF34Q969K3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RNF34Q969K3 CYP4F24P-201ENST00000586049 1580 ntBASIC16.72■□□□□ 0.27
RNF34Q969K3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF34Q969K3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF34Q969K3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF34Q969K3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF34Q969K3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF34Q969K3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF34Q969K3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
RNF34Q969K3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RNF34Q969K3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF34Q969K3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF34Q969K3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF34Q969K3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF34Q969K3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF34Q969K3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RNF34Q969K3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF34Q969K3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RNF34Q969K3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RNF34Q969K3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF34Q969K3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF34Q969K3 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.72■□□□□ 0.27
RNF34Q969K3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms