Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Lysmd4Q8CC84 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Gm26315-201ENSMUST00000083890 321 ntBASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.59□□□□□ -0.55
Lysmd4Q8CC84 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Lysmd4Q8CC84 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Lysmd4Q8CC84 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Lysmd4Q8CC84 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Lysmd4Q8CC84 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Mir686-201ENSMUST00000102174 109 ntBASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Gm21854-201ENSMUST00000179901 471 ntBASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Gm5279-201ENSMUST00000199575 745 ntBASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lysmd4Q8CC84 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lysmd4Q8CC84 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms