Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN2P51788 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN2P51788 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.54■□□□□ 0.08
CLCN2P51788 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.53■□□□□ 0.08
CLCN2P51788 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCN2P51788 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CLCN2P51788 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CLCN2P51788 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CLCN2P51788 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CLCN2P51788 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 AL355306.1-201ENST00000415580 579 ntBASIC15.53■□□□□ 0.08
CLCN2P51788 AC092474.2-201ENST00000424288 719 ntBASIC15.53■□□□□ 0.08
CLCN2P51788 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCN2P51788 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 AP000344.2-201ENST00000512987 629 ntBASIC15.53■□□□□ 0.08
CLCN2P51788 RARRES2P8-201ENST00000566335 367 ntBASIC15.53■□□□□ 0.08
CLCN2P51788 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCN2P51788 AP001160.2-201ENST00000596071 487 ntBASIC15.53■□□□□ 0.08
CLCN2P51788 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 AC099522.2-201ENST00000607001 744 ntBASIC15.53■□□□□ 0.08
CLCN2P51788 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 AL596442.2-201ENST00000610240 980 ntBASIC15.53■□□□□ 0.08
CLCN2P51788 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.53■□□□□ 0.08
CLCN2P51788 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CLCN2P51788 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
CLCN2P51788 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CLCN2P51788 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCN2P51788 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN2P51788 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN2P51788 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCN2P51788 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCN2P51788 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCN2P51788 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCN2P51788 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
CLCN2P51788 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN2P51788 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN2P51788 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCN2P51788 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN2P51788 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCN2P51788 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCN2P51788 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCN2P51788 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN2P51788 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN2P51788 AL390755.1-201ENST00000623716 2027 ntBASIC15.52■□□□□ 0.08
CLCN2P51788 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN2P51788 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN2P51788 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN2P51788 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN2P51788 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCN2P51788 CNN2P11-201ENST00000429351 262 ntBASIC15.52■□□□□ 0.08
CLCN2P51788 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.52■□□□□ 0.08
CLCN2P51788 SPDYE11-202ENST00000450699 704 ntBASIC15.52■□□□□ 0.08
CLCN2P51788 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCN2P51788 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.52■□□□□ 0.08
CLCN2P51788 SPDYE9P-201ENST00000570642 692 ntBASIC15.52■□□□□ 0.08
CLCN2P51788 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CLCN2P51788 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLCN2P51788 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CLCN2P51788 AC021097.1-201ENST00000607902 574 ntBASIC15.52■□□□□ 0.08
CLCN2P51788 AC026120.1-201ENST00000611536 926 ntBASIC15.52■□□□□ 0.08
CLCN2P51788 SPDYE10P-202ENST00000612005 668 ntBASIC15.52■□□□□ 0.08
CLCN2P51788 SPDYE8P-202ENST00000612377 668 ntBASIC15.52■□□□□ 0.08
CLCN2P51788 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN2P51788 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN2P51788 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CLCN2P51788 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CLCN2P51788 NFIC-211ENST00000641145 8399 ntBASIC15.52■□□□□ 0.07
CLCN2P51788 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCN2P51788 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms