Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nif3l1Q9EQ80 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nif3l1Q9EQ80 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nif3l1Q9EQ80 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.05■□□□□ 0.96
Nif3l1Q9EQ80 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nif3l1Q9EQ80 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Nif3l1Q9EQ80 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
Nif3l1Q9EQ80 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nif3l1Q9EQ80 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nif3l1Q9EQ80 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.04■□□□□ 0.96
Nif3l1Q9EQ80 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nif3l1Q9EQ80 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Nif3l1Q9EQ80 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.04■□□□□ 0.96
Nif3l1Q9EQ80 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nif3l1Q9EQ80 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nif3l1Q9EQ80 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nif3l1Q9EQ80 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nif3l1Q9EQ80 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nif3l1Q9EQ80 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.03■□□□□ 0.96
Nif3l1Q9EQ80 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nif3l1Q9EQ80 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Nif3l1Q9EQ80 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nif3l1Q9EQ80 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nif3l1Q9EQ80 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nif3l1Q9EQ80 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nif3l1Q9EQ80 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nif3l1Q9EQ80 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nif3l1Q9EQ80 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Nif3l1Q9EQ80 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.02■□□□□ 0.96
Nif3l1Q9EQ80 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Nif3l1Q9EQ80 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nif3l1Q9EQ80 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Nif3l1Q9EQ80 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.01■□□□□ 0.95
Nif3l1Q9EQ80 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Nif3l1Q9EQ80 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nif3l1Q9EQ80 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Nif3l1Q9EQ80 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nif3l1Q9EQ80 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nif3l1Q9EQ80 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nif3l1Q9EQ80 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nif3l1Q9EQ80 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21■□□□□ 0.95
Nif3l1Q9EQ80 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21■□□□□ 0.95
Nif3l1Q9EQ80 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nif3l1Q9EQ80 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21■□□□□ 0.95
Nif3l1Q9EQ80 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.99■□□□□ 0.95
Nif3l1Q9EQ80 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nif3l1Q9EQ80 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nif3l1Q9EQ80 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nif3l1Q9EQ80 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.99■□□□□ 0.95
Nif3l1Q9EQ80 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Nif3l1Q9EQ80 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Nif3l1Q9EQ80 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nif3l1Q9EQ80 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nif3l1Q9EQ80 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nif3l1Q9EQ80 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nif3l1Q9EQ80 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Nif3l1Q9EQ80 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nif3l1Q9EQ80 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nif3l1Q9EQ80 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nif3l1Q9EQ80 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nif3l1Q9EQ80 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nif3l1Q9EQ80 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.98■□□□□ 0.95
Nif3l1Q9EQ80 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Nif3l1Q9EQ80 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nif3l1Q9EQ80 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nif3l1Q9EQ80 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Nif3l1Q9EQ80 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nif3l1Q9EQ80 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nif3l1Q9EQ80 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nif3l1Q9EQ80 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nif3l1Q9EQ80 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nif3l1Q9EQ80 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.97■□□□□ 0.95
Nif3l1Q9EQ80 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Nif3l1Q9EQ80 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nif3l1Q9EQ80 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nif3l1Q9EQ80 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.96■□□□□ 0.95
Nif3l1Q9EQ80 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nif3l1Q9EQ80 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nif3l1Q9EQ80 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nif3l1Q9EQ80 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nif3l1Q9EQ80 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.96■□□□□ 0.95
Nif3l1Q9EQ80 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nif3l1Q9EQ80 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.96■□□□□ 0.95
Nif3l1Q9EQ80 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nif3l1Q9EQ80 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nif3l1Q9EQ80 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nif3l1Q9EQ80 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.95■□□□□ 0.94
Nif3l1Q9EQ80 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Nif3l1Q9EQ80 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nif3l1Q9EQ80 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Nif3l1Q9EQ80 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Nif3l1Q9EQ80 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nif3l1Q9EQ80 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nif3l1Q9EQ80 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nif3l1Q9EQ80 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nif3l1Q9EQ80 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nif3l1Q9EQ80 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nif3l1Q9EQ80 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nif3l1Q9EQ80 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nif3l1Q9EQ80 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms