Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb8Q91XZ2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb8Q91XZ2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhb8Q91XZ2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb8Q91XZ2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb8Q91XZ2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhb8Q91XZ2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb8Q91XZ2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdhb8Q91XZ2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb8Q91XZ2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdhb8Q91XZ2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb8Q91XZ2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb8Q91XZ2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb8Q91XZ2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb8Q91XZ2 Cap2-205ENSMUST00000225824 1634 ntBASIC20.64■□□□□ 0.9
Pcdhb8Q91XZ2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb8Q91XZ2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb8Q91XZ2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb8Q91XZ2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb8Q91XZ2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb8Q91XZ2 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.64■□□□□ 0.89
Pcdhb8Q91XZ2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pcdhb8Q91XZ2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb8Q91XZ2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb8Q91XZ2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb8Q91XZ2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Pcdhb8Q91XZ2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb8Q91XZ2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb8Q91XZ2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb8Q91XZ2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb8Q91XZ2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb8Q91XZ2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb8Q91XZ2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb8Q91XZ2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb8Q91XZ2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb8Q91XZ2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb8Q91XZ2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb8Q91XZ2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb8Q91XZ2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb8Q91XZ2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb8Q91XZ2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcdhb8Q91XZ2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.6■□□□□ 0.89
Pcdhb8Q91XZ2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb8Q91XZ2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb8Q91XZ2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb8Q91XZ2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb8Q91XZ2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Pcdhb8Q91XZ2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb8Q91XZ2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb8Q91XZ2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb8Q91XZ2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb8Q91XZ2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb8Q91XZ2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb8Q91XZ2 Notumos-201ENSMUST00000151998 2659 ntBASIC20.58■□□□□ 0.89
Pcdhb8Q91XZ2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhb8Q91XZ2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb8Q91XZ2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb8Q91XZ2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.58■□□□□ 0.88
Pcdhb8Q91XZ2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb8Q91XZ2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb8Q91XZ2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb8Q91XZ2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pcdhb8Q91XZ2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb8Q91XZ2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb8Q91XZ2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb8Q91XZ2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb8Q91XZ2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pcdhb8Q91XZ2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb8Q91XZ2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Pcdhb8Q91XZ2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb8Q91XZ2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb8Q91XZ2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb8Q91XZ2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb8Q91XZ2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
Pcdhb8Q91XZ2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb8Q91XZ2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb8Q91XZ2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb8Q91XZ2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb8Q91XZ2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb8Q91XZ2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb8Q91XZ2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb8Q91XZ2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb8Q91XZ2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb8Q91XZ2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb8Q91XZ2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb8Q91XZ2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.54■□□□□ 0.88
Pcdhb8Q91XZ2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb8Q91XZ2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb8Q91XZ2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb8Q91XZ2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb8Q91XZ2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhb8Q91XZ2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb8Q91XZ2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb8Q91XZ2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.53■□□□□ 0.88
Pcdhb8Q91XZ2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb8Q91XZ2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.52■□□□□ 0.88
Pcdhb8Q91XZ2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb8Q91XZ2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.52■□□□□ 0.88
Pcdhb8Q91XZ2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb8Q91XZ2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms