Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Pcdhgb4Q91XX6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.4■■□□□ 1.18
Pcdhgb4Q91XX6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhgb4Q91XX6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Pcdhgb4Q91XX6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhgb4Q91XX6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
Pcdhgb4Q91XX6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgb4Q91XX6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgb4Q91XX6 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.38■■□□□ 1.17
Pcdhgb4Q91XX6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Pcdhgb4Q91XX6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgb4Q91XX6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgb4Q91XX6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgb4Q91XX6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgb4Q91XX6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgb4Q91XX6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgb4Q91XX6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgb4Q91XX6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgb4Q91XX6 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.37■■□□□ 1.17
Pcdhgb4Q91XX6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgb4Q91XX6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.37■■□□□ 1.17
Pcdhgb4Q91XX6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgb4Q91XX6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgb4Q91XX6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgb4Q91XX6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.36■■□□□ 1.17
Pcdhgb4Q91XX6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgb4Q91XX6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Pcdhgb4Q91XX6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgb4Q91XX6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
Pcdhgb4Q91XX6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgb4Q91XX6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgb4Q91XX6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhgb4Q91XX6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Pcdhgb4Q91XX6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhgb4Q91XX6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhgb4Q91XX6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Pcdhgb4Q91XX6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhgb4Q91XX6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Pcdhgb4Q91XX6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhgb4Q91XX6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb4Q91XX6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.34■■□□□ 1.17
Pcdhgb4Q91XX6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Pcdhgb4Q91XX6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb4Q91XX6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.17
Pcdhgb4Q91XX6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhgb4Q91XX6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhgb4Q91XX6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhgb4Q91XX6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhgb4Q91XX6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
Pcdhgb4Q91XX6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhgb4Q91XX6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhgb4Q91XX6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhgb4Q91XX6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Pcdhgb4Q91XX6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb4Q91XX6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb4Q91XX6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb4Q91XX6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb4Q91XX6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Pcdhgb4Q91XX6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb4Q91XX6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.31■■□□□ 1.16
Pcdhgb4Q91XX6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Pcdhgb4Q91XX6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb4Q91XX6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb4Q91XX6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb4Q91XX6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgb4Q91XX6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgb4Q91XX6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.3■■□□□ 1.16
Pcdhgb4Q91XX6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
Pcdhgb4Q91XX6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb4Q91XX6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb4Q91XX6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb4Q91XX6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb4Q91XX6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb4Q91XX6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb4Q91XX6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Pcdhgb4Q91XX6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhgb4Q91XX6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhgb4Q91XX6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhgb4Q91XX6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.28■■□□□ 1.16
Pcdhgb4Q91XX6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhgb4Q91XX6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.27■■□□□ 1.16
Pcdhgb4Q91XX6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhgb4Q91XX6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhgb4Q91XX6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhgb4Q91XX6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgb4Q91XX6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgb4Q91XX6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgb4Q91XX6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgb4Q91XX6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgb4Q91XX6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgb4Q91XX6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgb4Q91XX6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgb4Q91XX6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.26■■□□□ 1.15
Pcdhgb4Q91XX6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Pcdhgb4Q91XX6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgb4Q91XX6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgb4Q91XX6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgb4Q91XX6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgb4Q91XX6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgb4Q91XX6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms