Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgb5Q91XX5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgb5Q91XX5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgb5Q91XX5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgb5Q91XX5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Pcdhgb5Q91XX5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgb5Q91XX5 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.06■□□□□ 0.96
Pcdhgb5Q91XX5 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.06■□□□□ 0.96
Pcdhgb5Q91XX5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgb5Q91XX5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgb5Q91XX5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Pcdhgb5Q91XX5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgb5Q91XX5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgb5Q91XX5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.05■□□□□ 0.96
Pcdhgb5Q91XX5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.05■□□□□ 0.96
Pcdhgb5Q91XX5 Gm21956-201ENSMUST00000179946 522 ntBASIC21.05■□□□□ 0.96
Pcdhgb5Q91XX5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.05■□□□□ 0.96
Pcdhgb5Q91XX5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgb5Q91XX5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Pcdhgb5Q91XX5 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgb5Q91XX5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgb5Q91XX5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgb5Q91XX5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgb5Q91XX5 Gm12821-201ENSMUST00000120022 600 ntBASIC21.04■□□□□ 0.96
Pcdhgb5Q91XX5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.04■□□□□ 0.96
Pcdhgb5Q91XX5 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.04■□□□□ 0.96
Pcdhgb5Q91XX5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgb5Q91XX5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgb5Q91XX5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgb5Q91XX5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgb5Q91XX5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.04■□□□□ 0.96
Pcdhgb5Q91XX5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.03■□□□□ 0.96
Pcdhgb5Q91XX5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.03■□□□□ 0.96
Pcdhgb5Q91XX5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgb5Q91XX5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgb5Q91XX5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgb5Q91XX5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.02■□□□□ 0.96
Pcdhgb5Q91XX5 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.02■□□□□ 0.96
Pcdhgb5Q91XX5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Pcdhgb5Q91XX5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgb5Q91XX5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
Pcdhgb5Q91XX5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgb5Q91XX5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdhgb5Q91XX5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgb5Q91XX5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgb5Q91XX5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
Pcdhgb5Q91XX5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhgb5Q91XX5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb5Q91XX5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb5Q91XX5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb5Q91XX5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21■□□□□ 0.95
Pcdhgb5Q91XX5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb5Q91XX5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb5Q91XX5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb5Q91XX5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb5Q91XX5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb5Q91XX5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb5Q91XX5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb5Q91XX5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb5Q91XX5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb5Q91XX5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.99■□□□□ 0.95
Pcdhgb5Q91XX5 Golgb1-201ENSMUST00000023534 498 ntBASIC20.99■□□□□ 0.95
Pcdhgb5Q91XX5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb5Q91XX5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb5Q91XX5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb5Q91XX5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb5Q91XX5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcdhgb5Q91XX5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb5Q91XX5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhgb5Q91XX5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb5Q91XX5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhgb5Q91XX5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pcdhgb5Q91XX5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb5Q91XX5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdhgb5Q91XX5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.97■□□□□ 0.95
Pcdhgb5Q91XX5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Pcdhgb5Q91XX5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdhgb5Q91XX5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgb5Q91XX5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgb5Q91XX5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdhgb5Q91XX5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.96■□□□□ 0.95
Pcdhgb5Q91XX5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhgb5Q91XX5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb5Q91XX5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb5Q91XX5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb5Q91XX5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdhgb5Q91XX5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb5Q91XX5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb5Q91XX5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdhgb5Q91XX5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb5Q91XX5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgb5Q91XX5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgb5Q91XX5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.94■□□□□ 0.94
Pcdhgb5Q91XX5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgb5Q91XX5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
Pcdhgb5Q91XX5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb5Q91XX5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb5Q91XX5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb5Q91XX5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcdhgb5Q91XX5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms