Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Mrpl47Q8K2Y7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.97■□□□□ 0.95
Mrpl47Q8K2Y7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mrpl47Q8K2Y7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mrpl47Q8K2Y7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mrpl47Q8K2Y7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mrpl47Q8K2Y7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mrpl47Q8K2Y7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl47Q8K2Y7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl47Q8K2Y7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl47Q8K2Y7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl47Q8K2Y7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl47Q8K2Y7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl47Q8K2Y7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl47Q8K2Y7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl47Q8K2Y7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl47Q8K2Y7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mrpl47Q8K2Y7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Mrpl47Q8K2Y7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mrpl47Q8K2Y7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mrpl47Q8K2Y7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
Mrpl47Q8K2Y7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mrpl47Q8K2Y7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mrpl47Q8K2Y7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mrpl47Q8K2Y7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mrpl47Q8K2Y7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.94■□□□□ 0.94
Mrpl47Q8K2Y7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mrpl47Q8K2Y7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mrpl47Q8K2Y7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mrpl47Q8K2Y7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mrpl47Q8K2Y7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Mrpl47Q8K2Y7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mrpl47Q8K2Y7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Mrpl47Q8K2Y7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Mrpl47Q8K2Y7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Mrpl47Q8K2Y7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Mrpl47Q8K2Y7 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.92■□□□□ 0.94
Mrpl47Q8K2Y7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Mrpl47Q8K2Y7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Mrpl47Q8K2Y7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Mrpl47Q8K2Y7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mrpl47Q8K2Y7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mrpl47Q8K2Y7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mrpl47Q8K2Y7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Mrpl47Q8K2Y7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.91■□□□□ 0.94
Mrpl47Q8K2Y7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mrpl47Q8K2Y7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mrpl47Q8K2Y7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mrpl47Q8K2Y7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mrpl47Q8K2Y7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mrpl47Q8K2Y7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mrpl47Q8K2Y7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Mrpl47Q8K2Y7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mrpl47Q8K2Y7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mrpl47Q8K2Y7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mrpl47Q8K2Y7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Mrpl47Q8K2Y7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mrpl47Q8K2Y7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Mrpl47Q8K2Y7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Mrpl47Q8K2Y7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.89■□□□□ 0.94
Mrpl47Q8K2Y7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mrpl47Q8K2Y7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mrpl47Q8K2Y7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mrpl47Q8K2Y7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mrpl47Q8K2Y7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mrpl47Q8K2Y7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mrpl47Q8K2Y7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.89■□□□□ 0.93
Mrpl47Q8K2Y7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mrpl47Q8K2Y7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mrpl47Q8K2Y7 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.89■□□□□ 0.93
Mrpl47Q8K2Y7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mrpl47Q8K2Y7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Mrpl47Q8K2Y7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mrpl47Q8K2Y7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Mrpl47Q8K2Y7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Mrpl47Q8K2Y7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mrpl47Q8K2Y7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Mrpl47Q8K2Y7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mrpl47Q8K2Y7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mrpl47Q8K2Y7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mrpl47Q8K2Y7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mrpl47Q8K2Y7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mrpl47Q8K2Y7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.87■□□□□ 0.93
Mrpl47Q8K2Y7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Mrpl47Q8K2Y7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.87■□□□□ 0.93
Mrpl47Q8K2Y7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mrpl47Q8K2Y7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mrpl47Q8K2Y7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Mrpl47Q8K2Y7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Mrpl47Q8K2Y7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mrpl47Q8K2Y7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Mrpl47Q8K2Y7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mrpl47Q8K2Y7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mrpl47Q8K2Y7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mrpl47Q8K2Y7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mrpl47Q8K2Y7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
Mrpl47Q8K2Y7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mrpl47Q8K2Y7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mrpl47Q8K2Y7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mrpl47Q8K2Y7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms