Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Pcdhga7Q6DD96 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga7Q6DD96 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhga7Q6DD96 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga7Q6DD96 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga7Q6DD96 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhga7Q6DD96 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhga7Q6DD96 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga7Q6DD96 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcdhga7Q6DD96 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.46■□□□□ 0.87
Pcdhga7Q6DD96 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga7Q6DD96 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcdhga7Q6DD96 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga7Q6DD96 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga7Q6DD96 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhga7Q6DD96 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga7Q6DD96 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.45■□□□□ 0.86
Pcdhga7Q6DD96 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga7Q6DD96 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdhga7Q6DD96 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga7Q6DD96 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdhga7Q6DD96 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.45■□□□□ 0.86
Pcdhga7Q6DD96 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga7Q6DD96 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga7Q6DD96 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga7Q6DD96 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga7Q6DD96 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga7Q6DD96 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga7Q6DD96 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga7Q6DD96 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga7Q6DD96 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga7Q6DD96 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdhga7Q6DD96 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga7Q6DD96 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.44■□□□□ 0.86
Pcdhga7Q6DD96 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga7Q6DD96 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga7Q6DD96 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga7Q6DD96 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Pcdhga7Q6DD96 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga7Q6DD96 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga7Q6DD96 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga7Q6DD96 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga7Q6DD96 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga7Q6DD96 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga7Q6DD96 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga7Q6DD96 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga7Q6DD96 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Pcdhga7Q6DD96 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga7Q6DD96 Gm7332-201ENSMUST00000118351 454 ntBASIC20.42■□□□□ 0.86
Pcdhga7Q6DD96 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.42■□□□□ 0.86
Pcdhga7Q6DD96 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga7Q6DD96 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga7Q6DD96 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga7Q6DD96 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga7Q6DD96 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga7Q6DD96 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Pcdhga7Q6DD96 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga7Q6DD96 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.41■□□□□ 0.86
Pcdhga7Q6DD96 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga7Q6DD96 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga7Q6DD96 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga7Q6DD96 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga7Q6DD96 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga7Q6DD96 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga7Q6DD96 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga7Q6DD96 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga7Q6DD96 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga7Q6DD96 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pcdhga7Q6DD96 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga7Q6DD96 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhga7Q6DD96 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhga7Q6DD96 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhga7Q6DD96 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Pcdhga7Q6DD96 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhga7Q6DD96 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhga7Q6DD96 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.39■□□□□ 0.85
Pcdhga7Q6DD96 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhga7Q6DD96 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.39■□□□□ 0.85
Pcdhga7Q6DD96 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhga7Q6DD96 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhga7Q6DD96 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga7Q6DD96 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.38■□□□□ 0.85
Pcdhga7Q6DD96 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcdhga7Q6DD96 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.38■□□□□ 0.85
Pcdhga7Q6DD96 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga7Q6DD96 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga7Q6DD96 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga7Q6DD96 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga7Q6DD96 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.37■□□□□ 0.85
Pcdhga7Q6DD96 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga7Q6DD96 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga7Q6DD96 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga7Q6DD96 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga7Q6DD96 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga7Q6DD96 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga7Q6DD96 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga7Q6DD96 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdhga7Q6DD96 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga7Q6DD96 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga7Q6DD96 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms