Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rph3aP47708 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rph3aP47708 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rph3aP47708 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rph3aP47708 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rph3aP47708 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.35■□□□□ 0.85
Rph3aP47708 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rph3aP47708 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rph3aP47708 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rph3aP47708 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rph3aP47708 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rph3aP47708 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rph3aP47708 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rph3aP47708 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rph3aP47708 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rph3aP47708 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.34■□□□□ 0.85
Rph3aP47708 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Rph3aP47708 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rph3aP47708 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rph3aP47708 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rph3aP47708 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rph3aP47708 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Rph3aP47708 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rph3aP47708 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.33■□□□□ 0.85
Rph3aP47708 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rph3aP47708 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rph3aP47708 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rph3aP47708 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rph3aP47708 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rph3aP47708 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rph3aP47708 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rph3aP47708 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rph3aP47708 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rph3aP47708 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rph3aP47708 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rph3aP47708 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rph3aP47708 Gm43566-201ENSMUST00000196851 808 ntBASIC20.31■□□□□ 0.84
Rph3aP47708 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rph3aP47708 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.31■□□□□ 0.84
Rph3aP47708 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rph3aP47708 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.3■□□□□ 0.84
Rph3aP47708 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
Rph3aP47708 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rph3aP47708 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rph3aP47708 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rph3aP47708 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rph3aP47708 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rph3aP47708 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rph3aP47708 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rph3aP47708 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.3■□□□□ 0.84
Rph3aP47708 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rph3aP47708 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rph3aP47708 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rph3aP47708 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rph3aP47708 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rph3aP47708 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rph3aP47708 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rph3aP47708 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rph3aP47708 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rph3aP47708 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.28■□□□□ 0.84
Rph3aP47708 Gm13238-201ENSMUST00000117655 780 ntBASIC20.28■□□□□ 0.84
Rph3aP47708 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rph3aP47708 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rph3aP47708 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rph3aP47708 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rph3aP47708 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rph3aP47708 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rph3aP47708 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rph3aP47708 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.28■□□□□ 0.84
Rph3aP47708 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rph3aP47708 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rph3aP47708 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rph3aP47708 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.27■□□□□ 0.84
Rph3aP47708 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rph3aP47708 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.27■□□□□ 0.84
Rph3aP47708 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rph3aP47708 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rph3aP47708 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rph3aP47708 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Rph3aP47708 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Rph3aP47708 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rph3aP47708 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.26■□□□□ 0.83
Rph3aP47708 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rph3aP47708 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rph3aP47708 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rph3aP47708 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rph3aP47708 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.25■□□□□ 0.83
Rph3aP47708 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rph3aP47708 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rph3aP47708 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rph3aP47708 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rph3aP47708 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rph3aP47708 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rph3aP47708 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.23■□□□□ 0.83
Rph3aP47708 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rph3aP47708 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.23■□□□□ 0.83
Rph3aP47708 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rph3aP47708 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rph3aP47708 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rph3aP47708 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms