Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-2P42586 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-2P42586 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.53■□□□□ 0.72
Nkx2-2P42586 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Nkx2-2P42586 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-2P42586 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.52■□□□□ 0.72
Nkx2-2P42586 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-2P42586 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.52■□□□□ 0.72
Nkx2-2P42586 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-2P42586 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Nkx2-2P42586 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.52■□□□□ 0.71
Nkx2-2P42586 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-2P42586 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-2P42586 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-2P42586 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-2P42586 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-2P42586 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.51■□□□□ 0.71
Nkx2-2P42586 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nkx2-2P42586 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.51■□□□□ 0.71
Nkx2-2P42586 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nkx2-2P42586 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx2-2P42586 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.5■□□□□ 0.71
Nkx2-2P42586 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.5■□□□□ 0.71
Nkx2-2P42586 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-2P42586 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.49■□□□□ 0.71
Nkx2-2P42586 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-2P42586 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-2P42586 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.49■□□□□ 0.71
Nkx2-2P42586 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-2P42586 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Nkx2-2P42586 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-2P42586 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-2P42586 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-2P42586 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-2P42586 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-2P42586 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-2P42586 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-2P42586 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.48■□□□□ 0.71
Nkx2-2P42586 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-2P42586 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.48■□□□□ 0.71
Nkx2-2P42586 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-2P42586 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-2P42586 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Nkx2-2P42586 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Nkx2-2P42586 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-2P42586 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-2P42586 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.48■□□□□ 0.71
Nkx2-2P42586 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.47■□□□□ 0.71
Nkx2-2P42586 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-2P42586 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nkx2-2P42586 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-2P42586 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-2P42586 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-2P42586 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-2P42586 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-2P42586 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-2P42586 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.46■□□□□ 0.71
Nkx2-2P42586 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
Nkx2-2P42586 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.46■□□□□ 0.71
Nkx2-2P42586 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-2P42586 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-2P42586 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-2P42586 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-2P42586 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-2P42586 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.45■□□□□ 0.7
Nkx2-2P42586 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.45■□□□□ 0.7
Nkx2-2P42586 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-2P42586 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-2P42586 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-2P42586 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-2P42586 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-2P42586 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-2P42586 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.44■□□□□ 0.7
Nkx2-2P42586 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-2P42586 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
Nkx2-2P42586 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-2P42586 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nkx2-2P42586 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-2P42586 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Nkx2-2P42586 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-2P42586 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Nkx2-2P42586 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Nkx2-2P42586 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.43■□□□□ 0.7
Nkx2-2P42586 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Nkx2-2P42586 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nkx2-2P42586 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-2P42586 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-2P42586 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-2P42586 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-2P42586 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-2P42586 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-2P42586 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-2P42586 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-2P42586 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-2P42586 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-2P42586 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-2P42586 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-2P42586 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-2P42586 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nkx2-2P42586 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms