Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Nckap1P28660 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nckap1P28660 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Nckap1P28660 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nckap1P28660 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nckap1P28660 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nckap1P28660 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nckap1P28660 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nckap1P28660 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nckap1P28660 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.07■□□□□ 0.96
Nckap1P28660 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nckap1P28660 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nckap1P28660 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nckap1P28660 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nckap1P28660 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nckap1P28660 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nckap1P28660 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nckap1P28660 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nckap1P28660 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nckap1P28660 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Nckap1P28660 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nckap1P28660 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nckap1P28660 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nckap1P28660 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nckap1P28660 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nckap1P28660 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nckap1P28660 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nckap1P28660 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nckap1P28660 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nckap1P28660 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nckap1P28660 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nckap1P28660 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nckap1P28660 Gm12922-201ENSMUST00000120626 809 ntBASIC21.03■□□□□ 0.96
Nckap1P28660 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nckap1P28660 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nckap1P28660 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.03■□□□□ 0.96
Nckap1P28660 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nckap1P28660 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nckap1P28660 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nckap1P28660 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nckap1P28660 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nckap1P28660 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
Nckap1P28660 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.02■□□□□ 0.96
Nckap1P28660 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nckap1P28660 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Nckap1P28660 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Nckap1P28660 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nckap1P28660 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nckap1P28660 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.01■□□□□ 0.95
Nckap1P28660 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.01■□□□□ 0.95
Nckap1P28660 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nckap1P28660 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21■□□□□ 0.95
Nckap1P28660 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Nckap1P28660 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nckap1P28660 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21■□□□□ 0.95
Nckap1P28660 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21■□□□□ 0.95
Nckap1P28660 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nckap1P28660 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nckap1P28660 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nckap1P28660 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nckap1P28660 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nckap1P28660 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nckap1P28660 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nckap1P28660 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Nckap1P28660 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nckap1P28660 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nckap1P28660 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nckap1P28660 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.98■□□□□ 0.95
Nckap1P28660 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.98■□□□□ 0.95
Nckap1P28660 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Nckap1P28660 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
Nckap1P28660 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nckap1P28660 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nckap1P28660 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nckap1P28660 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nckap1P28660 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nckap1P28660 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Nckap1P28660 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nckap1P28660 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Nckap1P28660 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nckap1P28660 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nckap1P28660 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Nckap1P28660 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.96■□□□□ 0.95
Nckap1P28660 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.96■□□□□ 0.95
Nckap1P28660 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nckap1P28660 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nckap1P28660 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Nckap1P28660 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nckap1P28660 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Nckap1P28660 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nckap1P28660 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nckap1P28660 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nckap1P28660 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Nckap1P28660 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nckap1P28660 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nckap1P28660 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nckap1P28660 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nckap1P28660 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nckap1P28660 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nckap1P28660 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms