Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nid1P10493 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nid1P10493 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nid1P10493 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nid1P10493 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nid1P10493 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.92■□□□□ 0.78
Nid1P10493 Gm10420-201ENSMUST00000121713 882 ntBASIC19.92■□□□□ 0.78
Nid1P10493 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nid1P10493 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nid1P10493 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nid1P10493 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nid1P10493 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nid1P10493 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Nid1P10493 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nid1P10493 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nid1P10493 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nid1P10493 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nid1P10493 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nid1P10493 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.9■□□□□ 0.78
Nid1P10493 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nid1P10493 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nid1P10493 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nid1P10493 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Nid1P10493 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nid1P10493 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.89■□□□□ 0.77
Nid1P10493 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Nid1P10493 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nid1P10493 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Nid1P10493 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nid1P10493 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nid1P10493 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.88■□□□□ 0.77
Nid1P10493 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nid1P10493 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.88■□□□□ 0.77
Nid1P10493 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nid1P10493 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nid1P10493 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nid1P10493 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nid1P10493 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.88■□□□□ 0.77
Nid1P10493 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nid1P10493 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nid1P10493 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nid1P10493 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nid1P10493 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nid1P10493 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nid1P10493 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nid1P10493 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nid1P10493 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nid1P10493 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nid1P10493 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nid1P10493 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.86■□□□□ 0.77
Nid1P10493 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nid1P10493 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nid1P10493 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nid1P10493 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nid1P10493 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nid1P10493 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.85■□□□□ 0.77
Nid1P10493 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nid1P10493 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.85■□□□□ 0.77
Nid1P10493 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
Nid1P10493 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nid1P10493 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nid1P10493 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nid1P10493 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nid1P10493 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Nid1P10493 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nid1P10493 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.84■□□□□ 0.77
Nid1P10493 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nid1P10493 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nid1P10493 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nid1P10493 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Nid1P10493 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Nid1P10493 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nid1P10493 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Nid1P10493 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nid1P10493 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Nid1P10493 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nid1P10493 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.83■□□□□ 0.77
Nid1P10493 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.83■□□□□ 0.76
Nid1P10493 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nid1P10493 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nid1P10493 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nid1P10493 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nid1P10493 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nid1P10493 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nid1P10493 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nid1P10493 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nid1P10493 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.81■□□□□ 0.76
Nid1P10493 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nid1P10493 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.81■□□□□ 0.76
Nid1P10493 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nid1P10493 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nid1P10493 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
Nid1P10493 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Nid1P10493 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nid1P10493 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Nid1P10493 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Nid1P10493 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.8■□□□□ 0.76
Nid1P10493 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.8■□□□□ 0.76
Nid1P10493 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nid1P10493 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms