Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Capns1O88456 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Capns1O88456 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Capns1O88456 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Capns1O88456 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Capns1O88456 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Capns1O88456 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Capns1O88456 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Capns1O88456 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Capns1O88456 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Capns1O88456 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Capns1O88456 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Capns1O88456 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Capns1O88456 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Capns1O88456 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Capns1O88456 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Capns1O88456 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Capns1O88456 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.41■□□□□ 0.7
Capns1O88456 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Capns1O88456 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.41■□□□□ 0.7
Capns1O88456 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Capns1O88456 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Capns1O88456 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Capns1O88456 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Capns1O88456 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.4■□□□□ 0.7
Capns1O88456 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Capns1O88456 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Capns1O88456 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Capns1O88456 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Capns1O88456 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Capns1O88456 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Capns1O88456 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Capns1O88456 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Capns1O88456 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Capns1O88456 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Capns1O88456 Terc-201ENSMUST00000082862 423 ntBASIC19.39■□□□□ 0.69
Capns1O88456 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.39■□□□□ 0.69
Capns1O88456 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Capns1O88456 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Capns1O88456 Gm14523-201ENSMUST00000117260 558 ntBASIC19.38■□□□□ 0.69
Capns1O88456 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.38■□□□□ 0.69
Capns1O88456 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.38■□□□□ 0.69
Capns1O88456 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Capns1O88456 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Capns1O88456 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Capns1O88456 Gm5812-201ENSMUST00000061073 957 ntBASIC19.38■□□□□ 0.69
Capns1O88456 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Capns1O88456 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Capns1O88456 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Capns1O88456 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.37■□□□□ 0.69
Capns1O88456 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Capns1O88456 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Capns1O88456 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Capns1O88456 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Capns1O88456 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Capns1O88456 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Capns1O88456 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Capns1O88456 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Capns1O88456 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Capns1O88456 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.35■□□□□ 0.69
Capns1O88456 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
Capns1O88456 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Capns1O88456 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Capns1O88456 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Capns1O88456 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Capns1O88456 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Capns1O88456 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Capns1O88456 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Capns1O88456 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Capns1O88456 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Capns1O88456 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Capns1O88456 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Capns1O88456 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Capns1O88456 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Capns1O88456 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Capns1O88456 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Capns1O88456 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Capns1O88456 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Capns1O88456 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Capns1O88456 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Capns1O88456 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.33■□□□□ 0.68
Capns1O88456 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.33■□□□□ 0.68
Capns1O88456 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capns1O88456 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capns1O88456 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capns1O88456 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Capns1O88456 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capns1O88456 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capns1O88456 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Capns1O88456 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capns1O88456 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.32■□□□□ 0.68
Capns1O88456 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capns1O88456 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capns1O88456 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Capns1O88456 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Capns1O88456 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Capns1O88456 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Capns1O88456 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.31■□□□□ 0.68
Capns1O88456 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Capns1O88456 Iqck-206ENSMUST00000208658 2891 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 350.5 ms