Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ldb2O55203 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ldb2O55203 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Ldb2O55203 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ldb2O55203 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ldb2O55203 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ldb2O55203 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.15■□□□□ 0.98
Ldb2O55203 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.15■□□□□ 0.98
Ldb2O55203 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ldb2O55203 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ldb2O55203 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ldb2O55203 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.14■□□□□ 0.98
Ldb2O55203 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ldb2O55203 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ldb2O55203 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Ldb2O55203 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ldb2O55203 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ldb2O55203 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Ldb2O55203 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ldb2O55203 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.13■□□□□ 0.97
Ldb2O55203 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ldb2O55203 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ldb2O55203 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ldb2O55203 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ldb2O55203 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ldb2O55203 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ldb2O55203 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ldb2O55203 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.12■□□□□ 0.97
Ldb2O55203 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ldb2O55203 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ldb2O55203 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ldb2O55203 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ldb2O55203 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ldb2O55203 Gm43566-201ENSMUST00000196851 808 ntBASIC21.11■□□□□ 0.97
Ldb2O55203 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ldb2O55203 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ldb2O55203 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ldb2O55203 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ldb2O55203 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.1■□□□□ 0.97
Ldb2O55203 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ldb2O55203 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ldb2O55203 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ldb2O55203 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ldb2O55203 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ldb2O55203 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ldb2O55203 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ldb2O55203 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ldb2O55203 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ldb2O55203 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ldb2O55203 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ldb2O55203 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ldb2O55203 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.08■□□□□ 0.97
Ldb2O55203 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.08■□□□□ 0.97
Ldb2O55203 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ldb2O55203 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Ldb2O55203 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.07■□□□□ 0.96
Ldb2O55203 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.07■□□□□ 0.96
Ldb2O55203 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.07■□□□□ 0.96
Ldb2O55203 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ldb2O55203 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ldb2O55203 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ldb2O55203 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ldb2O55203 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ldb2O55203 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ldb2O55203 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ldb2O55203 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.06■□□□□ 0.96
Ldb2O55203 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.06■□□□□ 0.96
Ldb2O55203 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.06■□□□□ 0.96
Ldb2O55203 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ldb2O55203 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ldb2O55203 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ldb2O55203 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.05■□□□□ 0.96
Ldb2O55203 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ldb2O55203 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ldb2O55203 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.05■□□□□ 0.96
Ldb2O55203 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ldb2O55203 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ldb2O55203 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ldb2O55203 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ldb2O55203 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ldb2O55203 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ldb2O55203 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ldb2O55203 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ldb2O55203 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.03■□□□□ 0.96
Ldb2O55203 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Ldb2O55203 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.03■□□□□ 0.96
Ldb2O55203 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.03■□□□□ 0.96
Ldb2O55203 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ldb2O55203 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ldb2O55203 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ldb2O55203 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ldb2O55203 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ldb2O55203 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.02■□□□□ 0.96
Ldb2O55203 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Ldb2O55203 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ldb2O55203 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ldb2O55203 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
Ldb2O55203 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.01■□□□□ 0.95
Ldb2O55203 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ldb2O55203 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms