Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr4A2AN08 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ubr4A2AN08 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ubr4A2AN08 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ubr4A2AN08 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ubr4A2AN08 Gm10819-201ENSMUST00000099988 561 ntBASIC11.64□□□□□ -0.55
Ubr4A2AN08 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC11.64□□□□□ -0.55
Ubr4A2AN08 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ubr4A2AN08 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Ubr4A2AN08 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ubr4A2AN08 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ubr4A2AN08 Gm18671-201ENSMUST00000214826 683 ntBASIC11.64□□□□□ -0.55
Ubr4A2AN08 Gm18101-201ENSMUST00000215769 548 ntBASIC11.64□□□□□ -0.55
Ubr4A2AN08 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ubr4A2AN08 Gm10399-202ENSMUST00000202768 748 ntBASIC11.63□□□□□ -0.55
Ubr4A2AN08 Gm8093-201ENSMUST00000128935 1892 ntBASIC11.63□□□□□ -0.55
Ubr4A2AN08 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ubr4A2AN08 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Ubr4A2AN08 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ubr4A2AN08 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ubr4A2AN08 Gm10657-201ENSMUST00000193528 1031 ntBASIC11.62□□□□□ -0.55
Ubr4A2AN08 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ubr4A2AN08 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.62□□□□□ -0.55
Ubr4A2AN08 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ubr4A2AN08 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ubr4A2AN08 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Ubr4A2AN08 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ubr4A2AN08 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ubr4A2AN08 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ubr4A2AN08 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ubr4A2AN08 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC11.61□□□□□ -0.55
Ubr4A2AN08 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC11.61□□□□□ -0.55
Ubr4A2AN08 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC11.61□□□□□ -0.55
Ubr4A2AN08 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC11.61□□□□□ -0.55
Ubr4A2AN08 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC11.61□□□□□ -0.55
Ubr4A2AN08 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC11.61□□□□□ -0.55
Ubr4A2AN08 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ubr4A2AN08 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ubr4A2AN08 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ubr4A2AN08 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC11.6□□□□□ -0.55
Ubr4A2AN08 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ubr4A2AN08 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC11.6□□□□□ -0.55
Ubr4A2AN08 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ubr4A2AN08 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC11.6□□□□□ -0.55
Ubr4A2AN08 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ubr4A2AN08 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ubr4A2AN08 Gm28536-201ENSMUST00000190971 1317 ntBASIC11.6□□□□□ -0.55
Ubr4A2AN08 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC11.59□□□□□ -0.55
Ubr4A2AN08 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ubr4A2AN08 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ubr4A2AN08 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Ubr4A2AN08 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ubr4A2AN08 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC11.59□□□□□ -0.55
Ubr4A2AN08 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ubr4A2AN08 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ubr4A2AN08 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ubr4A2AN08 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ubr4A2AN08 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
Ubr4A2AN08 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC11.58□□□□□ -0.55
Ubr4A2AN08 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
Ubr4A2AN08 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubr4A2AN08 Gm12251-201ENSMUST00000117893 792 ntBASIC11.58□□□□□ -0.56
Ubr4A2AN08 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.58□□□□□ -0.56
Ubr4A2AN08 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC11.58□□□□□ -0.56
Ubr4A2AN08 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubr4A2AN08 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ubr4A2AN08 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ubr4A2AN08 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC11.58□□□□□ -0.56
Ubr4A2AN08 AV356131-201ENSMUST00000206201 750 ntBASIC11.58□□□□□ -0.56
Ubr4A2AN08 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ubr4A2AN08 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ubr4A2AN08 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ubr4A2AN08 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ubr4A2AN08 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ubr4A2AN08 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ubr4A2AN08 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ubr4A2AN08 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ubr4A2AN08 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ubr4A2AN08 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ubr4A2AN08 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC11.57□□□□□ -0.56
Ubr4A2AN08 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ubr4A2AN08 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ubr4A2AN08 Gm21362-201ENSMUST00000194272 928 ntBASIC11.56□□□□□ -0.56
Ubr4A2AN08 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Ubr4A2AN08 Gm20760-201ENSMUST00000179197 648 ntBASIC11.56□□□□□ -0.56
Ubr4A2AN08 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC11.56□□□□□ -0.56
Ubr4A2AN08 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.56□□□□□ -0.56
Ubr4A2AN08 AC164433.2-201ENSMUST00000226346 1701 ntBASIC11.56□□□□□ -0.56
Ubr4A2AN08 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubr4A2AN08 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubr4A2AN08 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubr4A2AN08 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubr4A2AN08 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC11.56□□□□□ -0.56
Ubr4A2AN08 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubr4A2AN08 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubr4A2AN08 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ubr4A2AN08 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubr4A2AN08 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ubr4A2AN08 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.55□□□□□ -0.56
Ubr4A2AN08 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 138.9 ms