Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Igkv1-88A0A140T8N1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Igkv1-88A0A140T8N1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Igkv1-88A0A140T8N1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Igkv1-88A0A140T8N1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Igkv1-88A0A140T8N1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Igkv1-88A0A140T8N1 Pkd1-207ENSMUST00000228550 1050 ntBASIC13.91□□□□□ -0.18
Igkv1-88A0A140T8N1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Igkv1-88A0A140T8N1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Igkv1-88A0A140T8N1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Igkv1-88A0A140T8N1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Igkv1-88A0A140T8N1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Igkv1-88A0A140T8N1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Igkv1-88A0A140T8N1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Igkv1-88A0A140T8N1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Igkv1-88A0A140T8N1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Igkv1-88A0A140T8N1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Igkv1-88A0A140T8N1 Gm22567-201ENSMUST00000175542 342 ntBASIC13.9□□□□□ -0.18
Igkv1-88A0A140T8N1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Igkv1-88A0A140T8N1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Igkv1-88A0A140T8N1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Igkv1-88A0A140T8N1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Igkv1-88A0A140T8N1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Igkv1-88A0A140T8N1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Igkv1-88A0A140T8N1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Igkv1-88A0A140T8N1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Igkv1-88A0A140T8N1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Igkv1-88A0A140T8N1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Igkv1-88A0A140T8N1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Igkv1-88A0A140T8N1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Igkv1-88A0A140T8N1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Igkv1-88A0A140T8N1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Igkv1-88A0A140T8N1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Igkv1-88A0A140T8N1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Igkv1-88A0A140T8N1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Igkv1-88A0A140T8N1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Igkv1-88A0A140T8N1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Igkv1-88A0A140T8N1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Igkv1-88A0A140T8N1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Igkv1-88A0A140T8N1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Igkv1-88A0A140T8N1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
Igkv1-88A0A140T8N1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Igkv1-88A0A140T8N1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC13.88□□□□□ -0.19
Igkv1-88A0A140T8N1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Igkv1-88A0A140T8N1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Igkv1-88A0A140T8N1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC13.88□□□□□ -0.19
Igkv1-88A0A140T8N1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Igkv1-88A0A140T8N1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Igkv1-88A0A140T8N1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Igkv1-88A0A140T8N1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Igkv1-88A0A140T8N1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Igkv1-88A0A140T8N1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Igkv1-88A0A140T8N1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Igkv1-88A0A140T8N1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Igkv1-88A0A140T8N1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Igkv1-88A0A140T8N1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.87□□□□□ -0.19
Igkv1-88A0A140T8N1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Igkv1-88A0A140T8N1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Igkv1-88A0A140T8N1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Igkv1-88A0A140T8N1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Igkv1-88A0A140T8N1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Igkv1-88A0A140T8N1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Igkv1-88A0A140T8N1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.86□□□□□ -0.19
Igkv1-88A0A140T8N1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC13.86□□□□□ -0.19
Igkv1-88A0A140T8N1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Igkv1-88A0A140T8N1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Igkv1-88A0A140T8N1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Igkv1-88A0A140T8N1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Igkv1-88A0A140T8N1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Igkv1-88A0A140T8N1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Igkv1-88A0A140T8N1 Gm12504-201ENSMUST00000120860 2231 ntBASIC13.86□□□□□ -0.19
Igkv1-88A0A140T8N1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC13.85□□□□□ -0.19
Igkv1-88A0A140T8N1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Igkv1-88A0A140T8N1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Igkv1-88A0A140T8N1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Igkv1-88A0A140T8N1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Igkv1-88A0A140T8N1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Igkv1-88A0A140T8N1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Igkv1-88A0A140T8N1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Igkv1-88A0A140T8N1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Igkv1-88A0A140T8N1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Igkv1-88A0A140T8N1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC13.85□□□□□ -0.19
Igkv1-88A0A140T8N1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Igkv1-88A0A140T8N1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Igkv1-88A0A140T8N1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Igkv1-88A0A140T8N1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Igkv1-88A0A140T8N1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC13.84□□□□□ -0.19
Igkv1-88A0A140T8N1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Igkv1-88A0A140T8N1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Igkv1-88A0A140T8N1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Igkv1-88A0A140T8N1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Igkv1-88A0A140T8N1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Igkv1-88A0A140T8N1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Igkv1-88A0A140T8N1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.83□□□□□ -0.19
Igkv1-88A0A140T8N1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Igkv1-88A0A140T8N1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC13.83□□□□□ -0.2
Igkv1-88A0A140T8N1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Igkv1-88A0A140T8N1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Igkv1-88A0A140T8N1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Igkv1-88A0A140T8N1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms