Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-4A0A075B654 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-4A0A075B654 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-4A0A075B654 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav3-4A0A075B654 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav3-4A0A075B654 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav3-4A0A075B654 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-4A0A075B654 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-4A0A075B654 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-4A0A075B654 AC157572.2-201ENSMUST00000226970 908 ntBASIC14.19□□□□□ -0.14
Trav3-4A0A075B654 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-4A0A075B654 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Trav3-4A0A075B654 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-4A0A075B654 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3-4A0A075B654 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trav3-4A0A075B654 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trav3-4A0A075B654 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-4A0A075B654 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-4A0A075B654 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav3-4A0A075B654 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav3-4A0A075B654 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-4A0A075B654 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-4A0A075B654 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-4A0A075B654 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-4A0A075B654 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav3-4A0A075B654 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3-4A0A075B654 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-4A0A075B654 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Trav3-4A0A075B654 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-4A0A075B654 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-4A0A075B654 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-4A0A075B654 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav3-4A0A075B654 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.17□□□□□ -0.14
Trav3-4A0A075B654 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav3-4A0A075B654 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav3-4A0A075B654 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3-4A0A075B654 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-4A0A075B654 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-4A0A075B654 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-4A0A075B654 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.16□□□□□ -0.14
Trav3-4A0A075B654 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3-4A0A075B654 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-4A0A075B654 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.15□□□□□ -0.14
Trav3-4A0A075B654 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-4A0A075B654 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-4A0A075B654 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav3-4A0A075B654 Gm43863-201ENSMUST00000203822 1192 ntBASIC14.15□□□□□ -0.14
Trav3-4A0A075B654 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-4A0A075B654 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-4A0A075B654 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Trav3-4A0A075B654 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav3-4A0A075B654 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Trav3-4A0A075B654 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-4A0A075B654 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-4A0A075B654 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-4A0A075B654 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Trav3-4A0A075B654 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-4A0A075B654 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-4A0A075B654 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-4A0A075B654 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.13□□□□□ -0.15
Trav3-4A0A075B654 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-4A0A075B654 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-4A0A075B654 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trav3-4A0A075B654 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav3-4A0A075B654 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-4A0A075B654 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-4A0A075B654 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-4A0A075B654 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-4A0A075B654 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-4A0A075B654 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-4A0A075B654 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-4A0A075B654 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-4A0A075B654 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-4A0A075B654 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-4A0A075B654 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-4A0A075B654 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-4A0A075B654 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-4A0A075B654 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-4A0A075B654 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-4A0A075B654 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-4A0A075B654 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav3-4A0A075B654 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms