Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26,68■■□□□ 1,86
Cldn9Q9Z0S7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26,61■■□□□ 1,85
Cldn9Q9Z0S7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,85
Cldn9Q9Z0S7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,85
Cldn9Q9Z0S7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26,57■■□□□ 1,84
Cldn9Q9Z0S7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26,57■■□□□ 1,84
Cldn9Q9Z0S7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26,55■■□□□ 1,84
Cldn9Q9Z0S7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26,53■■□□□ 1,84
Cldn9Q9Z0S7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26,52■■□□□ 1,84
Cldn9Q9Z0S7 Rab21-202ENSMUST00000218831 843 ntBASIC26,51■■□□□ 1,83
Cldn9Q9Z0S7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26,47■■□□□ 1,83
Cldn9Q9Z0S7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,81
Cldn9Q9Z0S7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Cldn9Q9Z0S7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26,36■■□□□ 1,81
Cldn9Q9Z0S7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26,35■■□□□ 1,81
Cldn9Q9Z0S7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26,34■■□□□ 1,81
Cldn9Q9Z0S7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26,33■■□□□ 1,81
Cldn9Q9Z0S7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26,31■■□□□ 1,8
Cldn9Q9Z0S7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26,26■■□□□ 1,79
Cldn9Q9Z0S7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26,25■■□□□ 1,79
Cldn9Q9Z0S7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26,24■■□□□ 1,79
Cldn9Q9Z0S7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26,24■■□□□ 1,79
Cldn9Q9Z0S7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26,19■■□□□ 1,78
Cldn9Q9Z0S7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26,19■■□□□ 1,78
Cldn9Q9Z0S7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26,18■■□□□ 1,78
Cldn9Q9Z0S7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26,17■■□□□ 1,78
Cldn9Q9Z0S7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26,17■■□□□ 1,78
Cldn9Q9Z0S7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26,13■■□□□ 1,77
Cldn9Q9Z0S7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26,13■■□□□ 1,77
Cldn9Q9Z0S7 Zfp131-207ENSMUST00000224946 1783 ntBASIC26,12■■□□□ 1,77
Cldn9Q9Z0S7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26,11■■□□□ 1,77
Cldn9Q9Z0S7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26,1■■□□□ 1,77
Cldn9Q9Z0S7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26,1■■□□□ 1,77
Cldn9Q9Z0S7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26,09■■□□□ 1,77
Cldn9Q9Z0S7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26,09■■□□□ 1,77
Cldn9Q9Z0S7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26,09■■□□□ 1,77
Cldn9Q9Z0S7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26,06■■□□□ 1,76
Cldn9Q9Z0S7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26,04■■□□□ 1,76
Cldn9Q9Z0S7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26,03■■□□□ 1,76
Cldn9Q9Z0S7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26,03■■□□□ 1,76
Cldn9Q9Z0S7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26,02■■□□□ 1,76
Cldn9Q9Z0S7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26,01■■□□□ 1,75
Cldn9Q9Z0S7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25,98■■□□□ 1,75
Cldn9Q9Z0S7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25,97■■□□□ 1,75
Cldn9Q9Z0S7 Gm25262-201ENSMUST00000174934 133 ntBASIC25,97■■□□□ 1,75
Cldn9Q9Z0S7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25,97■■□□□ 1,75
Cldn9Q9Z0S7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25,96■■□□□ 1,75
Cldn9Q9Z0S7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25,96■■□□□ 1,75
Cldn9Q9Z0S7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25,94■■□□□ 1,74
Cldn9Q9Z0S7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25,89■■□□□ 1,74
Cldn9Q9Z0S7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25,89■■□□□ 1,73
Cldn9Q9Z0S7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25,89■■□□□ 1,73
Cldn9Q9Z0S7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25,84■■□□□ 1,73
Cldn9Q9Z0S7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25,81■■□□□ 1,72
Cldn9Q9Z0S7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25,8■■□□□ 1,72
Cldn9Q9Z0S7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25,78■■□□□ 1,72
Cldn9Q9Z0S7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25,77■■□□□ 1,72
Cldn9Q9Z0S7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25,77■■□□□ 1,72
Cldn9Q9Z0S7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25,67■■□□□ 1,7
Cldn9Q9Z0S7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25,66■■□□□ 1,7
Cldn9Q9Z0S7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25,65■■□□□ 1,7
Cldn9Q9Z0S7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25,64■■□□□ 1,7
Cldn9Q9Z0S7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25,63■■□□□ 1,69
Cldn9Q9Z0S7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25,6■■□□□ 1,69
Cldn9Q9Z0S7 AL845457.1-201ENSMUST00000197244 68 ntBASIC25,59■■□□□ 1,69
Cldn9Q9Z0S7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25,54■■□□□ 1,68
Cldn9Q9Z0S7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25,53■■□□□ 1,68
Cldn9Q9Z0S7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25,53■■□□□ 1,68
Cldn9Q9Z0S7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25,53■■□□□ 1,68
Cldn9Q9Z0S7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25,52■■□□□ 1,68
Cldn9Q9Z0S7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25,5■■□□□ 1,67
Cldn9Q9Z0S7 Gm2415-204ENSMUST00000190235 2004 ntBASIC25,49■■□□□ 1,67
Cldn9Q9Z0S7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25,49■■□□□ 1,67
Cldn9Q9Z0S7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25,48■■□□□ 1,67
Cldn9Q9Z0S7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25,47■■□□□ 1,67
Cldn9Q9Z0S7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25,47■■□□□ 1,67
Cldn9Q9Z0S7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25,46■■□□□ 1,67
Cldn9Q9Z0S7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25,45■■□□□ 1,66
Cldn9Q9Z0S7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25,45■■□□□ 1,66
Cldn9Q9Z0S7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Cldn9Q9Z0S7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Cldn9Q9Z0S7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25,44■■□□□ 1,66
Cldn9Q9Z0S7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25,42■■□□□ 1,66
Cldn9Q9Z0S7 Mipep-204ENSMUST00000225043 1548 ntBASIC25,42■■□□□ 1,66
Cldn9Q9Z0S7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25,42■■□□□ 1,66
Cldn9Q9Z0S7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25,4■■□□□ 1,66
Cldn9Q9Z0S7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25,35■■□□□ 1,65
Cldn9Q9Z0S7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25,33■■□□□ 1,65
Cldn9Q9Z0S7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25,32■■□□□ 1,64
Cldn9Q9Z0S7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25,32■■□□□ 1,64
Cldn9Q9Z0S7 Gm6658-202ENSMUST00000209493 1885 ntBASIC25,32■■□□□ 1,64
Cldn9Q9Z0S7 Gm17082-201ENSMUST00000166043 1091 ntBASIC25,32■■□□□ 1,64
Cldn9Q9Z0S7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25,3■■□□□ 1,64
Cldn9Q9Z0S7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25,29■■□□□ 1,64
Cldn9Q9Z0S7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Cldn9Q9Z0S7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25,28■■□□□ 1,64
Cldn9Q9Z0S7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
Cldn9Q9Z0S7 Gm27322-201ENSMUST00000184007 104 ntBASIC25,27■■□□□ 1,64
Cldn9Q9Z0S7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25,26■■□□□ 1,63
Cldn9Q9Z0S7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25,24■■□□□ 1,63
Retrieved 100 of 76,532 protein–RNA pairs in 30,5 ms