Protein–RNA interactions for Protein: Q9WTN3

Srebf1, Sterol regulatory element-binding protein 1, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srebf1Q9WTN3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Srebf1Q9WTN3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.88■■□□□ 1.89
Srebf1Q9WTN3 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.88■■□□□ 1.89
Srebf1Q9WTN3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Srebf1Q9WTN3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Srebf1Q9WTN3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.79■■□□□ 1.88
Srebf1Q9WTN3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Srebf1Q9WTN3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.75■■□□□ 1.87
Srebf1Q9WTN3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Srebf1Q9WTN3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.71■■□□□ 1.87
Srebf1Q9WTN3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Srebf1Q9WTN3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
Srebf1Q9WTN3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Srebf1Q9WTN3 Gm27322-201ENSMUST00000184007 104 ntBASIC26.66■■□□□ 1.86
Srebf1Q9WTN3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.65■■□□□ 1.86
Srebf1Q9WTN3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Srebf1Q9WTN3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Srebf1Q9WTN3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.59■■□□□ 1.85
Srebf1Q9WTN3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Srebf1Q9WTN3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Srebf1Q9WTN3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Srebf1Q9WTN3 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.54■■□□□ 1.84
Srebf1Q9WTN3 Gm24804-201ENSMUST00000174982 85 ntBASIC26.53■■□□□ 1.84
Srebf1Q9WTN3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Srebf1Q9WTN3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Srebf1Q9WTN3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Srebf1Q9WTN3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Srebf1Q9WTN3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Srebf1Q9WTN3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Srebf1Q9WTN3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.37■■□□□ 1.81
Srebf1Q9WTN3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Srebf1Q9WTN3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Srebf1Q9WTN3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Srebf1Q9WTN3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Srebf1Q9WTN3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Srebf1Q9WTN3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Srebf1Q9WTN3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Srebf1Q9WTN3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.27■■□□□ 1.8
Srebf1Q9WTN3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Srebf1Q9WTN3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Srebf1Q9WTN3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Srebf1Q9WTN3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Srebf1Q9WTN3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Srebf1Q9WTN3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Srebf1Q9WTN3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Srebf1Q9WTN3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Srebf1Q9WTN3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.08■■□□□ 1.77
Srebf1Q9WTN3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Srebf1Q9WTN3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Srebf1Q9WTN3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Srebf1Q9WTN3 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.01■■□□□ 1.75
Srebf1Q9WTN3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Srebf1Q9WTN3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26■■□□□ 1.75
Srebf1Q9WTN3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26■■□□□ 1.75
Srebf1Q9WTN3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Srebf1Q9WTN3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Srebf1Q9WTN3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Srebf1Q9WTN3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Srebf1Q9WTN3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Srebf1Q9WTN3 Zfp131-205ENSMUST00000223812 663 ntBASIC25.95■■□□□ 1.74
Srebf1Q9WTN3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Srebf1Q9WTN3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.93■■□□□ 1.74
Srebf1Q9WTN3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Srebf1Q9WTN3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Srebf1Q9WTN3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.92■■□□□ 1.74
Srebf1Q9WTN3 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.9■■□□□ 1.74
Srebf1Q9WTN3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Srebf1Q9WTN3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Srebf1Q9WTN3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Srebf1Q9WTN3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Srebf1Q9WTN3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Srebf1Q9WTN3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Srebf1Q9WTN3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Srebf1Q9WTN3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Srebf1Q9WTN3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Srebf1Q9WTN3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Srebf1Q9WTN3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Srebf1Q9WTN3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Srebf1Q9WTN3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.69■■□□□ 1.7
Srebf1Q9WTN3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Srebf1Q9WTN3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Srebf1Q9WTN3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
Srebf1Q9WTN3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
Srebf1Q9WTN3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.63■■□□□ 1.69
Srebf1Q9WTN3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Srebf1Q9WTN3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Srebf1Q9WTN3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Srebf1Q9WTN3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Srebf1Q9WTN3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Srebf1Q9WTN3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Srebf1Q9WTN3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Srebf1Q9WTN3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Srebf1Q9WTN3 Gm16148-201ENSMUST00000119653 893 ntBASIC25.54■■□□□ 1.68
Srebf1Q9WTN3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Srebf1Q9WTN3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Srebf1Q9WTN3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Srebf1Q9WTN3 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.48■■□□□ 1.67
Srebf1Q9WTN3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Srebf1Q9WTN3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.46■■□□□ 1.67
Srebf1Q9WTN3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms