Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Gm25238-201ENSMUST00000174914 89 ntBASIC23.36■■□□□ 1.33
Rbfox1Q9JJ43 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.36■■□□□ 1.33
Rbfox1Q9JJ43 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rbfox1Q9JJ43 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.32■■□□□ 1.32
Rbfox1Q9JJ43 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Rbfox1Q9JJ43 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Rbfox1Q9JJ43 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rbfox1Q9JJ43 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rbfox1Q9JJ43 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rbfox1Q9JJ43 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
Rbfox1Q9JJ43 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rbfox1Q9JJ43 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rbfox1Q9JJ43 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rbfox1Q9JJ43 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.15■■□□□ 1.3
Rbfox1Q9JJ43 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.14■■□□□ 1.29
Rbfox1Q9JJ43 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rbfox1Q9JJ43 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
Rbfox1Q9JJ43 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rbfox1Q9JJ43 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.04■■□□□ 1.28
Rbfox1Q9JJ43 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rbfox1Q9JJ43 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rbfox1Q9JJ43 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rbfox1Q9JJ43 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.01■■□□□ 1.27
Rbfox1Q9JJ43 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rbfox1Q9JJ43 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rbfox1Q9JJ43 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rbfox1Q9JJ43 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rbfox1Q9JJ43 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.95■■□□□ 1.26
Rbfox1Q9JJ43 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Rbfox1Q9JJ43 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Rbfox1Q9JJ43 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.91■■□□□ 1.26
Rbfox1Q9JJ43 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Rbfox1Q9JJ43 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rbfox1Q9JJ43 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rbfox1Q9JJ43 Rab21-202ENSMUST00000218831 843 ntBASIC22.84■■□□□ 1.25
Rbfox1Q9JJ43 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rbfox1Q9JJ43 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.24
Rbfox1Q9JJ43 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rbfox1Q9JJ43 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rbfox1Q9JJ43 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rbfox1Q9JJ43 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rbfox1Q9JJ43 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rbfox1Q9JJ43 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rbfox1Q9JJ43 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rbfox1Q9JJ43 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rbfox1Q9JJ43 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rbfox1Q9JJ43 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rbfox1Q9JJ43 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.71■■□□□ 1.23
Rbfox1Q9JJ43 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rbfox1Q9JJ43 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.68■■□□□ 1.22
Rbfox1Q9JJ43 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rbfox1Q9JJ43 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.67■■□□□ 1.22
Rbfox1Q9JJ43 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rbfox1Q9JJ43 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.65■■□□□ 1.22
Rbfox1Q9JJ43 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rbfox1Q9JJ43 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rbfox1Q9JJ43 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.63■■□□□ 1.21
Rbfox1Q9JJ43 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.62■■□□□ 1.21
Rbfox1Q9JJ43 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.62■■□□□ 1.21
Rbfox1Q9JJ43 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rbfox1Q9JJ43 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rbfox1Q9JJ43 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Rbfox1Q9JJ43 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Rbfox1Q9JJ43 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rbfox1Q9JJ43 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rbfox1Q9JJ43 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rbfox1Q9JJ43 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Rbfox1Q9JJ43 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rbfox1Q9JJ43 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rbfox1Q9JJ43 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rbfox1Q9JJ43 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.49■■□□□ 1.19
Rbfox1Q9JJ43 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rbfox1Q9JJ43 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rbfox1Q9JJ43 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Rbfox1Q9JJ43 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rbfox1Q9JJ43 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rbfox1Q9JJ43 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rbfox1Q9JJ43 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rbfox1Q9JJ43 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.4■■□□□ 1.18
Rbfox1Q9JJ43 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rbfox1Q9JJ43 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rbfox1Q9JJ43 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rbfox1Q9JJ43 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.36■■□□□ 1.17
Rbfox1Q9JJ43 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Rbfox1Q9JJ43 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rbfox1Q9JJ43 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rbfox1Q9JJ43 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rbfox1Q9JJ43 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rbfox1Q9JJ43 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rbfox1Q9JJ43 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Rbfox1Q9JJ43 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rbfox1Q9JJ43 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rbfox1Q9JJ43 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rbfox1Q9JJ43 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rbfox1Q9JJ43 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rbfox1Q9JJ43 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.22■■□□□ 1.15
Rbfox1Q9JJ43 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.21■■□□□ 1.15
Rbfox1Q9JJ43 Mipep-204ENSMUST00000225043 1548 ntBASIC22.2■■□□□ 1.14
Rbfox1Q9JJ43 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Rbfox1Q9JJ43 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms