Protein–RNA interactions for Protein: Q9D6Y7

Msra, Mitochondrial peptide methionine sulfoxide reductase, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsraQ9D6Y7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
MsraQ9D6Y7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC32.53■■■□□ 2.8
MsraQ9D6Y7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
MsraQ9D6Y7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
MsraQ9D6Y7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
MsraQ9D6Y7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
MsraQ9D6Y7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32.38■■■□□ 2.77
MsraQ9D6Y7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC32.38■■■□□ 2.77
MsraQ9D6Y7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
MsraQ9D6Y7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
MsraQ9D6Y7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
MsraQ9D6Y7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
MsraQ9D6Y7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.31■■■□□ 2.76
MsraQ9D6Y7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
MsraQ9D6Y7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.3■■■□□ 2.76
MsraQ9D6Y7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
MsraQ9D6Y7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
MsraQ9D6Y7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.2■■■□□ 2.75
MsraQ9D6Y7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
MsraQ9D6Y7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
MsraQ9D6Y7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
MsraQ9D6Y7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
MsraQ9D6Y7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
MsraQ9D6Y7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
MsraQ9D6Y7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
MsraQ9D6Y7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
MsraQ9D6Y7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
MsraQ9D6Y7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
MsraQ9D6Y7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
MsraQ9D6Y7 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.96■■■□□ 2.71
MsraQ9D6Y7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
MsraQ9D6Y7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
MsraQ9D6Y7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
MsraQ9D6Y7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
MsraQ9D6Y7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.86■■■□□ 2.69
MsraQ9D6Y7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
MsraQ9D6Y7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
MsraQ9D6Y7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
MsraQ9D6Y7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
MsraQ9D6Y7 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.72■■■□□ 2.67
MsraQ9D6Y7 Gm16148-201ENSMUST00000119653 893 ntBASIC31.7■■■□□ 2.67
MsraQ9D6Y7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31.69■■■□□ 2.66
MsraQ9D6Y7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
MsraQ9D6Y7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
MsraQ9D6Y7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
MsraQ9D6Y7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
MsraQ9D6Y7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
MsraQ9D6Y7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.56■■■□□ 2.64
MsraQ9D6Y7 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.54■■■□□ 2.64
MsraQ9D6Y7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
MsraQ9D6Y7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
MsraQ9D6Y7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
MsraQ9D6Y7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
MsraQ9D6Y7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
MsraQ9D6Y7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.44■■■□□ 2.62
MsraQ9D6Y7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
MsraQ9D6Y7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.43■■■□□ 2.62
MsraQ9D6Y7 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.43■■■□□ 2.62
MsraQ9D6Y7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
MsraQ9D6Y7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
MsraQ9D6Y7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.36■■■□□ 2.61
MsraQ9D6Y7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
MsraQ9D6Y7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
MsraQ9D6Y7 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.33■■■□□ 2.61
MsraQ9D6Y7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.33■■■□□ 2.61
MsraQ9D6Y7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
MsraQ9D6Y7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
MsraQ9D6Y7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
MsraQ9D6Y7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.3■■■□□ 2.6
MsraQ9D6Y7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
MsraQ9D6Y7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
MsraQ9D6Y7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.26■■■□□ 2.59
MsraQ9D6Y7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
MsraQ9D6Y7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
MsraQ9D6Y7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
MsraQ9D6Y7 Gm45855-201ENSMUST00000212546 880 ntBASIC31.21■■■□□ 2.59
MsraQ9D6Y7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
MsraQ9D6Y7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
MsraQ9D6Y7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
MsraQ9D6Y7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
MsraQ9D6Y7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
MsraQ9D6Y7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
MsraQ9D6Y7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
MsraQ9D6Y7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.13■■■□□ 2.57
MsraQ9D6Y7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
MsraQ9D6Y7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.12■■■□□ 2.57
MsraQ9D6Y7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
MsraQ9D6Y7 Peli2-204ENSMUST00000226513 1320 ntBASIC31.12■■■□□ 2.57
MsraQ9D6Y7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
MsraQ9D6Y7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
MsraQ9D6Y7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
MsraQ9D6Y7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
MsraQ9D6Y7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
MsraQ9D6Y7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
MsraQ9D6Y7 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.97■■■□□ 2.55
MsraQ9D6Y7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
MsraQ9D6Y7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.93■■■□□ 2.54
MsraQ9D6Y7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
MsraQ9D6Y7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
MsraQ9D6Y7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms