Protein–RNA interactions for Protein: Q9D413

Sh2d6, SH2 domain-containing protein 6, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d6Q9D413 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23,07■■□□□ 1,28
Sh2d6Q9D413 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23,06■■□□□ 1,28
Sh2d6Q9D413 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23,05■■□□□ 1,28
Sh2d6Q9D413 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23,05■■□□□ 1,28
Sh2d6Q9D413 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23,04■■□□□ 1,28
Sh2d6Q9D413 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23,03■■□□□ 1,28
Sh2d6Q9D413 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23,03■■□□□ 1,28
Sh2d6Q9D413 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23,02■■□□□ 1,28
Sh2d6Q9D413 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22,99■■□□□ 1,27
Sh2d6Q9D413 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22,98■■□□□ 1,27
Sh2d6Q9D413 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22,97■■□□□ 1,27
Sh2d6Q9D413 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22,96■■□□□ 1,27
Sh2d6Q9D413 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22,93■■□□□ 1,26
Sh2d6Q9D413 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22,89■■□□□ 1,26
Sh2d6Q9D413 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22,89■■□□□ 1,25
Sh2d6Q9D413 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22,88■■□□□ 1,25
Sh2d6Q9D413 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22,88■■□□□ 1,25
Sh2d6Q9D413 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22,88■■□□□ 1,25
Sh2d6Q9D413 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22,83■■□□□ 1,24
Sh2d6Q9D413 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22,78■■□□□ 1,24
Sh2d6Q9D413 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22,77■■□□□ 1,24
Sh2d6Q9D413 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22,77■■□□□ 1,24
Sh2d6Q9D413 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22,76■■□□□ 1,23
Sh2d6Q9D413 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22,75■■□□□ 1,23
Sh2d6Q9D413 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22,74■■□□□ 1,23
Sh2d6Q9D413 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22,74■■□□□ 1,23
Sh2d6Q9D413 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22,69■■□□□ 1,22
Sh2d6Q9D413 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22,66■■□□□ 1,22
Sh2d6Q9D413 Gm26115-201ENSMUST00000175605 87 ntBASIC22,66■■□□□ 1,22
Sh2d6Q9D413 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22,66■■□□□ 1,22
Sh2d6Q9D413 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22,65■■□□□ 1,22
Sh2d6Q9D413 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22,64■■□□□ 1,21
Sh2d6Q9D413 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22,6■■□□□ 1,21
Sh2d6Q9D413 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22,6■■□□□ 1,21
Sh2d6Q9D413 Gm8109-201ENSMUST00000194076 746 ntBASIC22,59■■□□□ 1,21
Sh2d6Q9D413 Gm17082-201ENSMUST00000166043 1091 ntBASIC22,58■■□□□ 1,21
Sh2d6Q9D413 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22,57■■□□□ 1,2
Sh2d6Q9D413 Zfp131-207ENSMUST00000224946 1783 ntBASIC22,55■■□□□ 1,2
Sh2d6Q9D413 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22,54■■□□□ 1,2
Sh2d6Q9D413 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22,51■■□□□ 1,19
Sh2d6Q9D413 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22,48■■□□□ 1,19
Sh2d6Q9D413 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22,48■■□□□ 1,19
Sh2d6Q9D413 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22,47■■□□□ 1,19
Sh2d6Q9D413 Gm27322-201ENSMUST00000184007 104 ntBASIC22,46■■□□□ 1,19
Sh2d6Q9D413 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22,46■■□□□ 1,19
Sh2d6Q9D413 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,45■■□□□ 1,18
Sh2d6Q9D413 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22,43■■□□□ 1,18
Sh2d6Q9D413 AL845457.1-201ENSMUST00000197244 68 ntBASIC22,42■■□□□ 1,18
Sh2d6Q9D413 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22,41■■□□□ 1,18
Sh2d6Q9D413 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22,4■■□□□ 1,18
Sh2d6Q9D413 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22,39■■□□□ 1,18
Sh2d6Q9D413 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22,38■■□□□ 1,17
Sh2d6Q9D413 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22,38■■□□□ 1,17
Sh2d6Q9D413 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22,37■■□□□ 1,17
Sh2d6Q9D413 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22,36■■□□□ 1,17
Sh2d6Q9D413 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
Sh2d6Q9D413 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22,34■■□□□ 1,17
Sh2d6Q9D413 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22,3■■□□□ 1,16
Sh2d6Q9D413 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22,3■■□□□ 1,16
Sh2d6Q9D413 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22,27■■□□□ 1,16
Sh2d6Q9D413 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22,27■■□□□ 1,16
Sh2d6Q9D413 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22,27■■□□□ 1,15
Sh2d6Q9D413 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22,23■■□□□ 1,15
Sh2d6Q9D413 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22,21■■□□□ 1,15
Sh2d6Q9D413 AC166822.3-201ENSMUST00000227394 661 ntBASIC22,2■■□□□ 1,14
Sh2d6Q9D413 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22,2■■□□□ 1,14
Sh2d6Q9D413 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22,2■■□□□ 1,14
Sh2d6Q9D413 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22,19■■□□□ 1,14
Sh2d6Q9D413 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22,18■■□□□ 1,14
Sh2d6Q9D413 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22,15■■□□□ 1,14
Sh2d6Q9D413 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22,14■■□□□ 1,13
Sh2d6Q9D413 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22,12■■□□□ 1,13
Sh2d6Q9D413 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22,11■■□□□ 1,13
Sh2d6Q9D413 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22,11■■□□□ 1,13
Sh2d6Q9D413 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22,1■■□□□ 1,13
Sh2d6Q9D413 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22,08■■□□□ 1,13
Sh2d6Q9D413 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22,08■■□□□ 1,13
Sh2d6Q9D413 Mipep-204ENSMUST00000225043 1548 ntBASIC22,07■■□□□ 1,12
Sh2d6Q9D413 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22,06■■□□□ 1,12
Sh2d6Q9D413 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22,03■■□□□ 1,12
Sh2d6Q9D413 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22,02■■□□□ 1,12
Sh2d6Q9D413 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22■■□□□ 1,11
Sh2d6Q9D413 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22■■□□□ 1,11
Sh2d6Q9D413 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21,99■■□□□ 1,11
Sh2d6Q9D413 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21,99■■□□□ 1,11
Sh2d6Q9D413 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21,96■■□□□ 1,11
Sh2d6Q9D413 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21,95■■□□□ 1,1
Sh2d6Q9D413 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21,93■■□□□ 1,1
Sh2d6Q9D413 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21,93■■□□□ 1,1
Sh2d6Q9D413 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21,92■■□□□ 1,1
Sh2d6Q9D413 Gm24804-201ENSMUST00000174982 85 ntBASIC21,91■■□□□ 1,1
Sh2d6Q9D413 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21,89■■□□□ 1,1
Sh2d6Q9D413 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21,89■■□□□ 1,09
Sh2d6Q9D413 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21,88■■□□□ 1,09
Sh2d6Q9D413 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21,88■■□□□ 1,09
Sh2d6Q9D413 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21,86■■□□□ 1,09
Sh2d6Q9D413 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21,84■■□□□ 1,09
Sh2d6Q9D413 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21,84■■□□□ 1,09
Sh2d6Q9D413 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21,8■■□□□ 1,08
Sh2d6Q9D413 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21,8■■□□□ 1,08
Retrieved 100 of 76,532 protein–RNA pairs in 9,5 ms