Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ssbp1Q9CYR0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssbp1Q9CYR0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssbp1Q9CYR0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ssbp1Q9CYR0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.84■□□□□ 0.77
Ssbp1Q9CYR0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssbp1Q9CYR0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ssbp1Q9CYR0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.8■□□□□ 0.76
Ssbp1Q9CYR0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssbp1Q9CYR0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.78■□□□□ 0.76
Ssbp1Q9CYR0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ssbp1Q9CYR0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssbp1Q9CYR0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssbp1Q9CYR0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssbp1Q9CYR0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssbp1Q9CYR0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssbp1Q9CYR0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssbp1Q9CYR0 Gm15045-201ENSMUST00000117359 883 ntBASIC19.71■□□□□ 0.75
Ssbp1Q9CYR0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ssbp1Q9CYR0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ssbp1Q9CYR0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssbp1Q9CYR0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssbp1Q9CYR0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ssbp1Q9CYR0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.63■□□□□ 0.73
Ssbp1Q9CYR0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.61■□□□□ 0.73
Ssbp1Q9CYR0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssbp1Q9CYR0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssbp1Q9CYR0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssbp1Q9CYR0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssbp1Q9CYR0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssbp1Q9CYR0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssbp1Q9CYR0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ssbp1Q9CYR0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssbp1Q9CYR0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssbp1Q9CYR0 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.53■□□□□ 0.72
Ssbp1Q9CYR0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssbp1Q9CYR0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssbp1Q9CYR0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssbp1Q9CYR0 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.44■□□□□ 0.7
Ssbp1Q9CYR0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ssbp1Q9CYR0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssbp1Q9CYR0 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.43■□□□□ 0.7
Ssbp1Q9CYR0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssbp1Q9CYR0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssbp1Q9CYR0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ssbp1Q9CYR0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssbp1Q9CYR0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssbp1Q9CYR0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssbp1Q9CYR0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssbp1Q9CYR0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
Ssbp1Q9CYR0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Ssbp1Q9CYR0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ssbp1Q9CYR0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssbp1Q9CYR0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ssbp1Q9CYR0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssbp1Q9CYR0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssbp1Q9CYR0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssbp1Q9CYR0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssbp1Q9CYR0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ssbp1Q9CYR0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssbp1Q9CYR0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ssbp1Q9CYR0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssbp1Q9CYR0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssbp1Q9CYR0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssbp1Q9CYR0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.23■□□□□ 0.67
Ssbp1Q9CYR0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Ssbp1Q9CYR0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssbp1Q9CYR0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssbp1Q9CYR0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ssbp1Q9CYR0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssbp1Q9CYR0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Ssbp1Q9CYR0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssbp1Q9CYR0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssbp1Q9CYR0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssbp1Q9CYR0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ssbp1Q9CYR0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssbp1Q9CYR0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssbp1Q9CYR0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssbp1Q9CYR0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ssbp1Q9CYR0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssbp1Q9CYR0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.13■□□□□ 0.65
Ssbp1Q9CYR0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssbp1Q9CYR0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssbp1Q9CYR0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssbp1Q9CYR0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Ssbp1Q9CYR0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ssbp1Q9CYR0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssbp1Q9CYR0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssbp1Q9CYR0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ssbp1Q9CYR0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ssbp1Q9CYR0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssbp1Q9CYR0 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.07■□□□□ 0.64
Ssbp1Q9CYR0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssbp1Q9CYR0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssbp1Q9CYR0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssbp1Q9CYR0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ssbp1Q9CYR0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssbp1Q9CYR0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssbp1Q9CYR0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ssbp1Q9CYR0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms