Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24,95■■□□□ 1,58
Trim13Q9CYB0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24,95■■□□□ 1,58
Trim13Q9CYB0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24,93■■□□□ 1,58
Trim13Q9CYB0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24,93■■□□□ 1,58
Trim13Q9CYB0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24,93■■□□□ 1,58
Trim13Q9CYB0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24,92■■□□□ 1,58
Trim13Q9CYB0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24,87■■□□□ 1,57
Trim13Q9CYB0 Gm27325-201ENSMUST00000175467 74 ntBASIC24,84■■□□□ 1,57
Trim13Q9CYB0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24,83■■□□□ 1,57
Trim13Q9CYB0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24,81■■□□□ 1,56
Trim13Q9CYB0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24,8■■□□□ 1,56
Trim13Q9CYB0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24,8■■□□□ 1,56
Trim13Q9CYB0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24,71■■□□□ 1,55
Trim13Q9CYB0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24,68■■□□□ 1,54
Trim13Q9CYB0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24,65■■□□□ 1,54
Trim13Q9CYB0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24,64■■□□□ 1,54
Trim13Q9CYB0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24,64■■□□□ 1,54
Trim13Q9CYB0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24,63■■□□□ 1,53
Trim13Q9CYB0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24,62■■□□□ 1,53
Trim13Q9CYB0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24,62■■□□□ 1,53
Trim13Q9CYB0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24,61■■□□□ 1,53
Trim13Q9CYB0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24,6■■□□□ 1,53
Trim13Q9CYB0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24,59■■□□□ 1,53
Trim13Q9CYB0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,53
Trim13Q9CYB0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24,57■■□□□ 1,52
Trim13Q9CYB0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24,56■■□□□ 1,52
Trim13Q9CYB0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24,54■■□□□ 1,52
Trim13Q9CYB0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24,49■■□□□ 1,51
Trim13Q9CYB0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24,49■■□□□ 1,51
Trim13Q9CYB0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24,48■■□□□ 1,51
Trim13Q9CYB0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24,48■■□□□ 1,51
Trim13Q9CYB0 Gm25238-201ENSMUST00000174914 89 ntBASIC24,47■■□□□ 1,51
Trim13Q9CYB0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24,44■■□□□ 1,5
Trim13Q9CYB0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24,44■■□□□ 1,5
Trim13Q9CYB0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24,43■■□□□ 1,5
Trim13Q9CYB0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24,41■■□□□ 1,5
Trim13Q9CYB0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24,4■■□□□ 1,5
Trim13Q9CYB0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24,39■■□□□ 1,49
Trim13Q9CYB0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24,35■■□□□ 1,49
Trim13Q9CYB0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24,34■■□□□ 1,49
Trim13Q9CYB0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24,34■■□□□ 1,49
Trim13Q9CYB0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24,32■■□□□ 1,48
Trim13Q9CYB0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24,32■■□□□ 1,48
Trim13Q9CYB0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24,3■■□□□ 1,48
Trim13Q9CYB0 Zfp131-207ENSMUST00000224946 1783 ntBASIC24,29■■□□□ 1,48
Trim13Q9CYB0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24,27■■□□□ 1,48
Trim13Q9CYB0 Gm2415-204ENSMUST00000190235 2004 ntBASIC24,26■■□□□ 1,47
Trim13Q9CYB0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24,25■■□□□ 1,47
Trim13Q9CYB0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24,24■■□□□ 1,47
Trim13Q9CYB0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24,24■■□□□ 1,47
Trim13Q9CYB0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24,23■■□□□ 1,47
Trim13Q9CYB0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24,21■■□□□ 1,47
Trim13Q9CYB0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24,2■■□□□ 1,47
Trim13Q9CYB0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24,18■■□□□ 1,46
Trim13Q9CYB0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24,17■■□□□ 1,46
Trim13Q9CYB0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24,17■■□□□ 1,46
Trim13Q9CYB0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24,15■■□□□ 1,46
Trim13Q9CYB0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24,14■■□□□ 1,46
Trim13Q9CYB0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24,13■■□□□ 1,45
Trim13Q9CYB0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24,11■■□□□ 1,45
Trim13Q9CYB0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24,1■■□□□ 1,45
Trim13Q9CYB0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24,09■■□□□ 1,45
Trim13Q9CYB0 Gm6658-202ENSMUST00000209493 1885 ntBASIC24,09■■□□□ 1,45
Trim13Q9CYB0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24,08■■□□□ 1,45
Trim13Q9CYB0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24,08■■□□□ 1,44
Trim13Q9CYB0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24,05■■□□□ 1,44
Trim13Q9CYB0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24,03■■□□□ 1,44
Trim13Q9CYB0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24,01■■□□□ 1,43
Trim13Q9CYB0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24■■□□□ 1,43
Trim13Q9CYB0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24■■□□□ 1,43
Trim13Q9CYB0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23,99■■□□□ 1,43
Trim13Q9CYB0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23,99■■□□□ 1,43
Trim13Q9CYB0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23,99■■□□□ 1,43
Trim13Q9CYB0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23,98■■□□□ 1,43
Trim13Q9CYB0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23,97■■□□□ 1,43
Trim13Q9CYB0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23,97■■□□□ 1,43
Trim13Q9CYB0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23,96■■□□□ 1,43
Trim13Q9CYB0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23,95■■□□□ 1,42
Trim13Q9CYB0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23,95■■□□□ 1,42
Trim13Q9CYB0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23,91■■□□□ 1,42
Trim13Q9CYB0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23,91■■□□□ 1,42
Trim13Q9CYB0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23,9■■□□□ 1,42
Trim13Q9CYB0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23,89■■□□□ 1,42
Trim13Q9CYB0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23,89■■□□□ 1,41
Trim13Q9CYB0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23,87■■□□□ 1,41
Trim13Q9CYB0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23,87■■□□□ 1,41
Trim13Q9CYB0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23,86■■□□□ 1,41
Trim13Q9CYB0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23,83■■□□□ 1,41
Trim13Q9CYB0 Rab21-202ENSMUST00000218831 843 ntBASIC23,83■■□□□ 1,41
Trim13Q9CYB0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23,82■■□□□ 1,4
Trim13Q9CYB0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23,82■■□□□ 1,4
Trim13Q9CYB0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23,82■■□□□ 1,4
Trim13Q9CYB0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23,81■■□□□ 1,4
Trim13Q9CYB0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23,8■■□□□ 1,4
Trim13Q9CYB0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23,8■■□□□ 1,4
Trim13Q9CYB0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23,78■■□□□ 1,4
Trim13Q9CYB0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23,77■■□□□ 1,4
Trim13Q9CYB0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23,76■■□□□ 1,39
Trim13Q9CYB0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23,76■■□□□ 1,39
Trim13Q9CYB0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23,75■■□□□ 1,39
Retrieved 100 of 76,532 protein–RNA pairs in 21,5 ms