Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Rnaseh2aQ9CWY8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
Rnaseh2aQ9CWY8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
Rnaseh2aQ9CWY8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.11■■■■□ 3.21
Rnaseh2aQ9CWY8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.1■■■■□ 3.21
Rnaseh2aQ9CWY8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.09■■■■□ 3.21
Rnaseh2aQ9CWY8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC35.06■■■■□ 3.2
Rnaseh2aQ9CWY8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC35.02■■■■□ 3.2
Rnaseh2aQ9CWY8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC35.01■■■■□ 3.19
Rnaseh2aQ9CWY8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34.95■■■■□ 3.19
Rnaseh2aQ9CWY8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Rnaseh2aQ9CWY8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
Rnaseh2aQ9CWY8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
Rnaseh2aQ9CWY8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC34.73■■■■□ 3.15
Rnaseh2aQ9CWY8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Rnaseh2aQ9CWY8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC34.69■■■■□ 3.14
Rnaseh2aQ9CWY8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Rnaseh2aQ9CWY8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Rnaseh2aQ9CWY8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC34.65■■■■□ 3.14
Rnaseh2aQ9CWY8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
Rnaseh2aQ9CWY8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.6■■■■□ 3.13
Rnaseh2aQ9CWY8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
Rnaseh2aQ9CWY8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC34.5■■■■□ 3.11
Rnaseh2aQ9CWY8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
Rnaseh2aQ9CWY8 Psd-208ENSMUST00000224556 2034 ntBASIC34.47■■■■□ 3.11
Rnaseh2aQ9CWY8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.42■■■■□ 3.1
Rnaseh2aQ9CWY8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Rnaseh2aQ9CWY8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC34.42■■■■□ 3.1
Rnaseh2aQ9CWY8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC34.37■■■■□ 3.09
Rnaseh2aQ9CWY8 AC166822.3-201ENSMUST00000227394 661 ntBASIC34.32■■■■□ 3.08
Rnaseh2aQ9CWY8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
Rnaseh2aQ9CWY8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC34.3■■■■□ 3.08
Rnaseh2aQ9CWY8 Tdp2-203ENSMUST00000223804 1136 ntBASIC34.29■■■■□ 3.08
Rnaseh2aQ9CWY8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Rnaseh2aQ9CWY8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
Rnaseh2aQ9CWY8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Rnaseh2aQ9CWY8 Gm16148-201ENSMUST00000119653 893 ntBASIC34.18■■■■□ 3.06
Rnaseh2aQ9CWY8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.18■■■■□ 3.06
Rnaseh2aQ9CWY8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
Rnaseh2aQ9CWY8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
Rnaseh2aQ9CWY8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC34.14■■■■□ 3.06
Rnaseh2aQ9CWY8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC34.13■■■■□ 3.05
Rnaseh2aQ9CWY8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Rnaseh2aQ9CWY8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
Rnaseh2aQ9CWY8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC34.07■■■■□ 3.04
Rnaseh2aQ9CWY8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC34.06■■■■□ 3.04
Rnaseh2aQ9CWY8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
Rnaseh2aQ9CWY8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC34.02■■■■□ 3.04
Rnaseh2aQ9CWY8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
Rnaseh2aQ9CWY8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC34.01■■■■□ 3.03
Rnaseh2aQ9CWY8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC33.98■■■■□ 3.03
Rnaseh2aQ9CWY8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Rnaseh2aQ9CWY8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC33.96■■■■□ 3.03
Rnaseh2aQ9CWY8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC33.94■■■■□ 3.02
Rnaseh2aQ9CWY8 Gm5987-201ENSMUST00000196433 1151 ntBASIC33.94■■■■□ 3.02
Rnaseh2aQ9CWY8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Rnaseh2aQ9CWY8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Rnaseh2aQ9CWY8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Rnaseh2aQ9CWY8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC33.89■■■■□ 3.02
Rnaseh2aQ9CWY8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
Rnaseh2aQ9CWY8 AL845457.1-201ENSMUST00000197244 68 ntBASIC33.82■■■■□ 3
Rnaseh2aQ9CWY8 Gm45855-201ENSMUST00000212546 880 ntBASIC33.82■■■■□ 3
Rnaseh2aQ9CWY8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC33.81■■■■□ 3
Rnaseh2aQ9CWY8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC33.8■■■■□ 3
Rnaseh2aQ9CWY8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC33.79■■■■□ 3
Rnaseh2aQ9CWY8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Rnaseh2aQ9CWY8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■■□ 3
Rnaseh2aQ9CWY8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC33.76■■■□□ 2.99
Rnaseh2aQ9CWY8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■□□ 2.99
Rnaseh2aQ9CWY8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC33.72■■■□□ 2.99
Rnaseh2aQ9CWY8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Rnaseh2aQ9CWY8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC33.67■■■□□ 2.98
Rnaseh2aQ9CWY8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC33.65■■■□□ 2.98
Rnaseh2aQ9CWY8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC33.65■■■□□ 2.98
Rnaseh2aQ9CWY8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
Rnaseh2aQ9CWY8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Rnaseh2aQ9CWY8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Rnaseh2aQ9CWY8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
Rnaseh2aQ9CWY8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Rnaseh2aQ9CWY8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Rnaseh2aQ9CWY8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Rnaseh2aQ9CWY8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC33.5■■■□□ 2.95
Rnaseh2aQ9CWY8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Rnaseh2aQ9CWY8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
Rnaseh2aQ9CWY8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC33.49■■■□□ 2.95
Rnaseh2aQ9CWY8 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.49■■■□□ 2.95
Rnaseh2aQ9CWY8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC33.48■■■□□ 2.95
Rnaseh2aQ9CWY8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC33.48■■■□□ 2.95
Rnaseh2aQ9CWY8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Rnaseh2aQ9CWY8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Rnaseh2aQ9CWY8 Peli2-204ENSMUST00000226513 1320 ntBASIC33.47■■■□□ 2.95
Rnaseh2aQ9CWY8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Rnaseh2aQ9CWY8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
Rnaseh2aQ9CWY8 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.44■■■□□ 2.94
Rnaseh2aQ9CWY8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33.41■■■□□ 2.94
Rnaseh2aQ9CWY8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Rnaseh2aQ9CWY8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
Rnaseh2aQ9CWY8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC33.35■■■□□ 2.93
Rnaseh2aQ9CWY8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Rnaseh2aQ9CWY8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC33.34■■■□□ 2.93
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms